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Comprehensive identification of genomic and environmental determinants of phenotypic plasticity in maize

  • Laura E. Tibbs-Cortes
  • Tingting Guo
  • Carson M. Andorf
  • Xianran Li
  • Jianming Yu
  • First Published September 13, 2024

Analyzing rare mutations in metagenomes assembled using long and accurate reads

  • Marcus W. Fedarko
  • Mikhail Kolmogorov
  • Pavel A. Pevzner
  • First Published November 23, 2022

Fast and accurate mapping of long reads to complete genome assemblies with VerityMap

  • Andrey V. Bzikadze
  • Alla Mikheenko
  • Pavel A. Pevzner
  • First Published November 15, 2022

Automated annotation of human centromeres with HORmon

  • Olga Kunyavskaya
  • Tatiana Dvorkina
  • Andrey V. Bzikadze
  • Ivan A. Alexandrov
  • Pavel A. Pevzner
  • First Published May 11, 2022

Gene prediction in the immunoglobulin loci

  • Vikram Sirupurapu
  • Yana Safonova
  • Pavel A. Pevzner
  • First Published May 11, 2022

Variations in antibody repertoires correlate with vaccine responses

  • Yana Safonova
  • Sung Bong Shin
  • Luke Kramer
  • James Reecy
  • Corey T. Watson
  • Timothy P.L. Smith
  • Pavel A. Pevzner
  • First Published March 31, 2022

V(DD)J recombination is an important and evolutionarily conserved mechanism for generating antibodies with unusually long CDR3s

  • Yana Safonova
  • Pavel A. Pevzner
  • First Published September 18, 2020

Dynamic effects of interacting genes underlying rice flowering-time phenotypic plasticity and global adaptation

  • Tingting Guo
  • Qi Mu
  • Jinyu Wang
  • Adam E. Vanous
  • Akio Onogi
  • Hiroyoshi Iwata
  • Xianran Li
  • Jianming Yu
  • First Published April 16, 2020

A high-resolution gene expression atlas links dedicated meristem genes to key architectural traits

  • Steffen Knauer
  • Marie Javelle
  • Lin Li
  • Xianran Li
  • Xiaoli Ma
  • Kokulapalan Wimalanathan Sunita Kumari Robyn Johnston Samuel Leiboff Robert Meeley Patrick S. Schnable Doreen Ware Carolyn Lawrence-Dill
  • ... [+8 authors] ...,
  • Jianming Yu
  • Gary J. Muehlbauer
  • Michael J. Scanlon
  • Marja C.P. Timmermans
  • First Published November 19, 2019

BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs

  • Dmitry Meleshko
  • Hosein Mohimani
  • Vittorio Tracanna
  • Iman Hajirasouliha
  • Marnix H. Medema
  • Anton Korobeynikov
  • Pavel A. Pevzner
  • First Published June 3, 2019
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