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Resource

Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs

  • Ashlyn G. Anderson
  • Belle A. Moyers
  • Jacob M. Loupe
  • Ivan Rodriguez-Nunez
  • Stephanie A. Felker
  • James M.J. Lawlor William E. Bunney Blynn G. Bunney Preston M. Cartagena Adolfo Sequeira Stanley J. Watson
  • ... [+6 authors] ...,
  • Huda Akil
  • Eric M. Mendenhall
  • Gregory M. Cooper
  • Richard M. Myers
  • First Published August 16, 2024
Method

cis-regulatory elements" > Probabilistic association of differentially expressed genes with cis-regulatory elements

  • Brian S. Roberts
  • Ashlyn G. Anderson
  • E. Christopher Partridge
  • Gregory M. Cooper
  • Richard M. Myers
  • First Published April 17, 2024
Research

Oikopleura dioica cryptic species" > Extreme genome scrambling in marine planktonic Oikopleura dioica cryptic species

  • Charles Plessy
  • Michael J. Mansfield
  • Aleksandra Bliznina
  • Aki Masunaga
  • Charlotte West
  • Yongkai Tan Andrew W. Liu Jan Grašič María Sara del Río Pisula Gaspar Sánchez-Serna Marc Fabrega-Torrus Alfonso Ferrández-Roldán Vittoria Roncalli Pavla Navratilova Eric M. Thompson
  • ... [+10 authors] ...,
  • Takeshi Onuma
  • Hiroki Nishida
  • Cristian Cañestro
  • Nicholas M. Luscombe
  • First Published April 15, 2024
Research

Characterization of human transcription factor function and patterns of gene regulation in HepG2 cells

  • Belle A. Moyers
  • E. Christopher Partridge
  • Mark Mackiewicz
  • Michael J. Betti
  • Roshan Darji
  • Sarah K. Meadows Kimberly M. Newberry
  • ... [+2 authors] ...,
  • Laurel A. Brandsmeier
  • Barbara J. Wold
  • Eric M. Mendenhall
  • Richard M. Myers
  • First Published October 18, 2023
In memoriam

C. Thomas Caskey (1938–2022)

  • Richard A. Gibbs
  • Aravinda Chakravarti
  • Evan E. Eichler
  • Eric D. Green
  • Richard M. Myers
  • Anne C. Ferguson-Smith
  • Kateryna D. Makova
  • Hillary E. Sussman
  • First Published February 17, 2022
In memoriam

Deborah A. Nickerson (1954 –2021)

  • Aravinda Chakravarti
  • Evan E. Eichler
  • Richard A. Gibbs
  • Eric D. Green
  • Richard M. Myers
  • Hillary E. Sussman
  • First Published January 24, 2022
Research

Meta-analysis of human and mouse ALS astrocytes reveals multi-omic signatures of inflammatory reactive states

  • Oliver J. Ziff
  • Benjamin E. Clarke
  • Doaa M. Taha
  • Hamish Crerar
  • Nicholas M. Luscombe
  • Rickie Patani
  • First Published December 28, 2021
Research

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

  • Brian S. Roberts
  • E. Christopher Partridge
  • Bryan A. Moyers
  • Vikram Agarwal
  • Kimberly M. Newberry
  • Beth K. Martin
  • Jay Shendure
  • Richard M. Myers
  • Gregory M. Cooper
  • First Published April 20, 2021
Research

Dissecting the regulatory activity and sequence content of loci with exceptional numbers of transcription factor associations

  • Ryne C. Ramaker
  • Andrew A. Hardigan
  • Say-Tar Goh
  • E. Christopher Partridge
  • Barbara Wold
  • Sara J. Cooper
  • Richard M. Myers
  • First Published July 2, 2020
Resource

Dynamics of microRNA expression during mouse prenatal development

  • Sorena Rahmanian
  • Rabi Murad
  • Alessandra Breschi
  • Weihua Zeng
  • Mark Mackiewicz
  • Brian Williams Carrie A. Davis Brian Roberts Sarah Meadows Dianna Moore Diane Trout Chris Zaleski Alex Dobin Lei-Hoon Sei Jorg Drenkow Alex Scavelli Thomas R. Gingeras
  • ... [+12 authors] ...,
  • Barbara J. Wold
  • Richard M. Myers
  • Roderic Guigó
  • Ali Mortazavi
  • First Published October 23, 2019
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