Search | Genome Research

CL_GR_GenSeq_728x90

Your search for returned 41 results

Research

3C sites in poly(A) RNA" > Nanopore direct RNA sequencing reveals METTL2A-mediated m³C sites in poly(A) RNA

Shuhei Mitsutomi
Anzu Sugawara
Masahide Seki
Yutaka Suzuki
Sotaro Miyao
Haozhe Du
... [+1 authors] ...,
Kenji Takahashi
Yusuke Mizukami
Kenzui Taniue
Nobuyoshi Akimitsu

First Published October 30, 2025

Research

Diurnal and eating-associated microbial patterns revealed via high-frequency saliva sampling

Yichen Hu
Amnon Amir
Xiaochang Huang
Yan Li
Shi Huang
Elaine Wolfe
Sophie Weiss
Rob Knight
Zhenjiang Zech Xu

First Published June 10, 2022

Method

Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes

George Armstrong
Kalen Cantrell
Shi Huang
Daniel McDonald
Niina Haiminen
Anna Paola Carrieri Qiyun Zhu Antonio Gonzalez Imran McGrath Kristen L. Beck Daniel Hakim Aki S. Havulinna Guillaume Méric Teemu Niiranen Leo Lahti Veikko Salomaa Mohit Jain Michael Inouye Austin D. Swafford
... [+14 authors] ...,
Ho-Cheol Kim
Laxmi Parida
Yoshiki Vázquez-Baeza
Rob Knight

First Published September 3, 2021

Research

Positive selective sweeps of epigenetic mutations regulating specialized metabolites in plants

Kazumasa Shirai
Mitsuhiko P. Sato
Ranko Nishi
Masahide Seki
Yutaka Suzuki
Kousuke Hanada

First Published May 18, 2021

Erratum

Erratum: Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information

Zhoutao Chen
Long Pham
Tsai-Chin Wu
Guoya Mo
Yu Xia
Peter L. Chang Devin Porter Tan Phan Huu Che Hao Tran Vikas Bansal Justin Shaffer Pedro Belda-Ferre Greg Humphrey Rob Knight
... [+10 authors] ...,
Pavel Pevzner
Son Pham
Yong Wang
Ming Lei

First Published May 3, 2021

Research

Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules

Jonathon L. Baker
James T. Morton
Márcia Dinis
Ruth Alvarez
Nini C. Tran
Rob Knight
Anna Edlund

First Published November 25, 2020

Research

Long-read sequencing for non-small-cell lung cancer genomes

Yoshitaka Sakamoto
Liu Xu
Masahide Seki
Toshiyuki T. Yokoyama
Masahiro Kasahara
Yukie Kashima Akihiro Ohashi Yoko Shimada Noriko Motoi Katsuya Tsuchihara Susumu S. Kobayashi
... [+6 authors] ...,
Takashi Kohno
Yuichi Shiraishi
Ayako Suzuki
Yutaka Suzuki

First Published September 4, 2020

Method

Metabolic labeling of RNA using multiple ribonucleoside analogs enables the simultaneous evaluation of RNA synthesis and degradation rates

Kentaro Kawata
Hiroyasu Wakida
Toshimichi Yamada
Kenzui Taniue
Han Han
Masahide Seki
Yutaka Suzuki
Nobuyoshi Akimitsu

First Published August 25, 2020

Method

Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information

Zhoutao Chen
Long Pham
Tsai-Chin Wu
Guoya Mo
Yu Xia
Peter L. Chang Devin Porter Tan Phan Huu Che Hao Tran Vikas Bansal Justin Shaffer Pedro Belda-Ferre Greg Humphrey Rob Knight
... [+10 authors] ...,
Pavel Pevzner
Son Pham
Yong Wang
Ming Lei

First Published June 15, 2020

Resource

Organ-level protein networks as a reference for the host effects of the microbiome

Robert H. Mills
Jacob M. Wozniak
Alison Vrbanac
Anaamika Campeau
Benoit Chassaing
Andrew Gewirtz
Rob Knight
David J. Gonzalez

First Published January 28, 2020

1
2
3