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Method

Highly accurate assembly polishing with DeepPolisher

  • First Published May 19, 2025
Perspective

Applications of single-cell genomics and computational strategies to study common disease and population-level variation

  • First Published October 1, 2021
Method

A joint deep learning model enables simultaneous batch effect correction, denoising, and clustering in single-cell transcriptomics

  • First Published May 25, 2021
Resource

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

  • First Published October 24, 2019
Resource

Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci

  • First Published September 19, 2019
Resource

The pig X and Y Chromosomes: structure, sequence, and evolution

  • First Published November 11, 2015
Resource

GENCODE: The reference human genome annotation for The ENCODE Project

  • First Published September 5, 2012
Resource

RNA-sequence analysis of human B-cells

  • First Published May 2, 2011
Methods

PennCNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data

  • First Published October 5, 2007
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