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Method

Highly accurate assembly polishing with DeepPolisher

  • First Published May 19, 2025
Method

Combining DNA and protein alignments to improve genome annotation with LiftOn

  • First Published December 27, 2024
Method

Effects of transcriptional noise on estimates of gene and transcript expression in RNA sequencing experiments

  • First Published December 23, 2020
Resource

A chromosome-level assembly of the Atlantic herring genome—detection of a supergene and other signals of selection

  • First Published October 24, 2019
Resource

Discovery of high-confidence human protein-coding genes and exons by whole-genome PhyloCSF helps elucidate 118 GWAS loci

  • First Published September 19, 2019
Research

Human contamination in bacterial genomes has created thousands of spurious proteins

  • First Published May 7, 2019
Resource

The pig X and Y Chromosomes: structure, sequence, and evolution

  • First Published November 11, 2015
Resource

Genome-wide annotation of microRNA primary transcript structures reveals novel regulatory mechanisms

  • First Published August 19, 2015
Resource

GENCODE: The reference human genome annotation for The ENCODE Project

  • First Published September 5, 2012
Methods

Computational Gene Prediction Using Multiple Sources of Evidence

  • First Published January 5, 2004
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