Search | Genome Research

Method

Copolymerization of single-cell nucleic acids into balls of acrylamide gel

Siran Li
Jude Kendall
Sarah Park
Zihua Wang
Joan Alexander
Andrea Moffitt Nissim Ranade Cassidy Danyko Bruno Gegenhuber Stephan Fischer Brian D. Robinson Herbert Lepor Jessica Tollkuhn Jesse Gillis
... [+9 authors] ...,
Eric Brouzes
Alex Krasnitz
Dan Levy
Michael Wigler

First Published November 14, 2019

Method

SMASH, a fragmentation and sequencing method for genomic copy number analysis

Zihua Wang
Peter Andrews
Jude Kendall
Beicong Ma
Inessa Hakker
Linda Rodgers
Michael Ronemus
Michael Wigler
Dan Levy

First Published April 14, 2016

Method

Optimizing sparse sequencing of single cells for highly multiplex copy number profiling

Timour Baslan
Jude Kendall
Brian Ward
Hilary Cox
Anthony Leotta
Linda Rodgers Michael Riggs Sean D'Italia Guoli Sun Mao Yong Kristy Miskimen Hannah Gilmore Michael Saborowski Nevenka Dimitrova
... [+9 authors] ...,
Alexander Krasnitz
Lyndsay Harris
Michael Wigler
James Hicks

First Published April 9, 2015

Method

Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm

Bo Zhang
Yan Zhou
Nan Lin
Rebecca F. Lowdon
Chibo Hong
Raman P. Nagarajan Jeffrey B. Cheng Daofeng Li Michael Stevens Hyung Joo Lee Xiaoyun Xing Jia Zhou Vasavi Sundaram GiNell Elliott Junchen Gu Taoping Shi Philippe Gascard Mahvash Sigaroudinia Thea D. Tlsty Theresa Kadlecek Arthur Weiss Henriette O’Geen Peggy J. Farnham Cécile L. Maire Keith L. Ligon Pamela A.F. Madden Angela Tam Richard Moore Martin Hirst
... [+24 authors] ...,
Marco A. Marra
Baoxue Zhang
Joseph F. Costello
Ting Wang

First Published June 26, 2013

Method

Estimating absolute methylation levels at single-CpG resolution from methylation enrichment and restriction enzyme sequencing methods

Michael Stevens
Jeffrey B. Cheng
Daofeng Li
Mingchao Xie
Chibo Hong
Cécile L. Maire Keith L. Ligon
... [+2 authors] ...,
Martin Hirst
Marco A. Marra
Joseph F. Costello
Ting Wang

First Published June 26, 2013

Methods

Inferring tumor progression from genomic heterogeneity

Nicholas Navin
Alexander Krasnitz
Linda Rodgers
Kerry Cook
Jennifer Meth
Jude Kendall Michael Riggs Yvonne Eberling Jennifer Troge Vladimir Grubor Dan Levy Pär Lundin
... [+7 authors] ...,
Susanne Månér
Anders Zetterberg
James Hicks
Michael Wigler

First Published November 10, 2009

Resource

The completion of the Mammalian Gene Collection (MGC)

Gary Temple
Daniela S. Gerhard
Rebekah Rasooly
Elise A. Feingold
Peter J. Good
Cristen Robinson Allison Mandich Jeffrey G. Derge Jeanne Lewis Debonny Shoaf Francis S. Collins Wonhee Jang Lukas Wagner Carolyn M. Shenmen Leonie Misquitta Carl F. Schaefer Kenneth H. Buetow Tom I. Bonner Linda Yankie Ming Ward Lon Phan Alex Astashyn Garth Brown Catherine Farrell Jennifer Hart Melissa Landrum Bonnie L. Maidak Michael Murphy Terence Murphy Bhanu Rajput Lillian Riddick David Webb Janet Weber Wendy Wu Kim D. Pruitt Donna Maglott Adam Siepel Brona Brejova Mark Diekhans Rachel Harte Robert Baertsch Jim Kent David Haussler Michael Brent Laura Langton Charles L.G. Comstock Michael Stevens Chaochun Wei Marijke J. van Baren Kourosh Salehi-Ashtiani Ryan R. Murray Lila Ghamsari Elizabeth Mello Chenwei Lin Christa Pennacchio Kirsten Schreiber Nicole Shapiro Amber Marsh Elizabeth Pardes Troy Moore Anita Lebeau Mike Muratet Blake Simmons David Kloske Stephanie Sieja James Hudson Praveen Sethupathy Michael Brownstein Narayan Bhat Joseph Lazar Howard Jacob Chris E. Gruber Mark R. Smith John McPherson Angela M. Garcia Preethi H. Gunaratne Jiaqian Wu Donna Muzny Richard A. Gibbs Alice C. Young Gerard G. Bouffard Robert W. Blakesley Jim Mullikin Eric D. Green Mark C. Dickson Alex C. Rodriguez Jane Grimwood Jeremy Schmutz Richard M. Myers Martin Hirst Thomas Zeng Kane Tse Michelle Moksa Merinda Deng Kevin Ma Diana Mah Johnson Pang Greg Taylor Eric Chuah Athena Deng Keith Fichter Anne Go Stephanie Lee Jing Wang Malachi Griffith Ryan Morin Richard A. Moore Michael Mayo Sarah Munro Susan Wagner Steven J.M. Jones Robert A. Holt Marco A. Marra Sun Lu Shuwei Yang James Hartigan Marcus Graf Ralf Wagner Stanley Letovksy Jacqueline C. Pulido Keith Robison Dominic Esposito James Hartley
... [+118 authors] ...,
Vanessa E. Wall
Ralph F. Hopkins
Osamu Ohara
Stefan Wiemann

First Published September 18, 2009

Methods

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

Emily Hodges
Andrew D. Smith
Jude Kendall
Zhenyu Xuan
Kandasamy Ravi
Michelle Rooks Michael Q. Zhang Kenny Ye Arindam Bhattacharjee Leonardo Brizuela
... [+5 authors] ...,
W. Richard McCombie
Michael Wigler
Gregory J. Hannon
James B. Hicks

First Published July 6, 2009

Methods

Targeted discovery of novel human exons by comparative genomics

Adam Siepel
Mark Diekhans
Broňa Brejová
Laura Langton
Michael Stevens
Charles L.G. Comstock Colleen Davis Brent Ewing Shelly Oommen Christopher Lau Hung-Chun Yu Jianfeng Li Bruce A. Roe Phil Green
... [+9 authors] ...,
Daniela S. Gerhard
Gary Temple
David Haussler
Michael R. Brent

First Published November 7, 2007

LETTER

Novel patterns of genome rearrangement and their association with survival in breast cancer

James Hicks
Alexander Krasnitz
B. Lakshmi
Nicholas E. Navin
Michael Riggs
Evan Leibu Diane Esposito Joan Alexander Jen Troge Vladimir Grubor Seungtai Yoon Michael Wigler Kenny Ye Anne-Lise Børresen-Dale Bjørn Naume Ellen Schlicting Larry Norton Torsten Hägerström Lambert Skoog
... [+14 authors] ...,
Gert Auer
Susanne Månér
Pär Lundin
Anders Zetterberg

First Published December 1, 2006

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Your search for returned 13 results

Method

Copolymerization of single-cell nucleic acids into balls of acrylamide gel

Method

SMASH, a fragmentation and sequencing method for genomic copy number analysis

Method

Optimizing sparse sequencing of single cells for highly multiplex copy number profiling

Method

Functional DNA methylation differences between tissues, cell types, and across individuals discovered using the M&M algorithm

Method

Estimating absolute methylation levels at single-CpG resolution from methylation enrichment and restriction enzyme sequencing methods

Methods

Inferring tumor progression from genomic heterogeneity

Resource

The completion of the Mammalian Gene Collection (MGC)

Methods

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

Methods

Targeted discovery of novel human exons by comparative genomics

LETTER

Novel patterns of genome rearrangement and their association with survival in breast cancer

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