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Your search for returned 49 results

Research

Diurnal and eating-associated microbial patterns revealed via high-frequency saliva sampling

Yichen Hu
Amnon Amir
Xiaochang Huang
Yan Li
Shi Huang
Elaine Wolfe
Sophie Weiss
Rob Knight
Zhenjiang Zech Xu

First Published June 10, 2022

Resource

Precision environmental health monitoring by longitudinal exposome and multi-omics profiling

Peng Gao
Xiaotao Shen
Xinyue Zhang
Chao Jiang
Sai Zhang
Xin Zhou
Sophia Miryam Schüssler-Fiorenza Rose
Michael Snyder

First Published June 6, 2022

Method

Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes

George Armstrong
Kalen Cantrell
Shi Huang
Daniel McDonald
Niina Haiminen
Anna Paola Carrieri Qiyun Zhu Antonio Gonzalez Imran McGrath Kristen L. Beck Daniel Hakim Aki S. Havulinna Guillaume Méric Teemu Niiranen Leo Lahti Veikko Salomaa Mohit Jain Michael Inouye Austin D. Swafford
... [+14 authors] ...,
Ho-Cheol Kim
Laxmi Parida
Yoshiki Vázquez-Baeza
Rob Knight

First Published September 3, 2021

Erratum

Erratum: Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information

Zhoutao Chen
Long Pham
Tsai-Chin Wu
Guoya Mo
Yu Xia
Peter L. Chang Devin Porter Tan Phan Huu Che Hao Tran Vikas Bansal Justin Shaffer Pedro Belda-Ferre Greg Humphrey Rob Knight
... [+10 authors] ...,
Pavel Pevzner
Son Pham
Yong Wang
Ming Lei

First Published May 3, 2021

Research

Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules

Jonathon L. Baker
James T. Morton
Márcia Dinis
Ruth Alvarez
Nini C. Tran
Rob Knight
Anna Edlund

First Published November 25, 2020

Method

Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information

Zhoutao Chen
Long Pham
Tsai-Chin Wu
Guoya Mo
Yu Xia
Peter L. Chang Devin Porter Tan Phan Huu Che Hao Tran Vikas Bansal Justin Shaffer Pedro Belda-Ferre Greg Humphrey Rob Knight
... [+10 authors] ...,
Pavel Pevzner
Son Pham
Yong Wang
Ming Lei

First Published June 15, 2020

Resource

Organ-level protein networks as a reference for the host effects of the microbiome

Robert H. Mills
Jacob M. Wozniak
Alison Vrbanac
Anaamika Campeau
Benoit Chassaing
Andrew Gewirtz
Rob Knight
David J. Gonzalez

First Published January 28, 2020

Method

Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome

Hagen Tilgner
Fereshteh Jahanbani
Ishaan Gupta
Paul Collier
Eric Wei
Morten Rasmussen
Michael Snyder

First Published December 1, 2017

Research

Genetic and environmental control of host-gut microbiota interactions

Elin Org
Brian W. Parks
Jong Wha J. Joo
Benjamin Emert
William Schwartzman
Eun Yong Kang Margarete Mehrabian Calvin Pan Rob Knight
... [+4 authors] ...,
Robert Gunsalus
Thomas A. Drake
Eleazar Eskin
Aldons J. Lusis

First Published August 10, 2015

Research

Meta-analyses of studies of the human microbiota

Catherine A. Lozupone
Jesse Stombaugh
Antonio Gonzalez
Gail Ackermann
Doug Wendel
Yoshiki Vázquez-Baeza
Janet K. Jansson
Jeffrey I. Gordon
Rob Knight

First Published July 16, 2013

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