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Resource

C. elegans balancer strains reveals previously unappreciated complex genomic rearrangements" > Genome sequencing of C. elegans balancer strains reveals previously unappreciated complex genomic rearrangements

  • Tatiana Maroilley
  • Stephane Flibotte
  • Francesca Jean
  • Victoria Rodrigues Alves Barbosa
  • Andrew Galbraith
  • Afiya Razia Chida Filip Cotra Xiao Li
  • ... [+3 authors] ...,
  • Larisa Oncea
  • Mark Edgley
  • Don Moerman
  • Maja Tarailo-Graovac
  • First Published December 5, 2022
Method

Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses

  • Yiming Kang
  • Nikhil R. Patel
  • Christian Shively
  • Pamela Samantha Recio
  • Xuhua Chen
  • Bernd J. Wranik
  • ... [+1 authors] ...,
  • Griffin Kim
  • R. Scott McIsaac
  • Robi Mitra
  • Michael R. Brent
  • First Published February 14, 2020
Resource

Burkholderia cenocepacia during long-term chronic infection of cystic fibrosis lungs" > Phenotypic diversity and genotypic flexibility of Burkholderia cenocepacia during long-term chronic infection of cystic fibrosis lungs

  • Amy Huei-Yi Lee
  • Stephane Flibotte
  • Sunita Sinha
  • Adrianna Paiero
  • Rachel L. Ehrlich
  • Sergey Balashov
  • ... [+1 authors] ...,
  • Garth D. Ehrlich
  • James E.A. Zlosnik
  • Joshua Chang Mell
  • Corey Nislow
  • First Published March 21, 2017
Method

Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation

  • Ezekiel J. Maier
  • Brian C. Haynes
  • Stacey R. Gish
  • Zhuo A. Wang
  • Michael L. Skowyra
  • Alyssa L. Marulli
  • Tamara L. Doering
  • Michael R. Brent
  • First Published February 2, 2015
Resource

Caenorhabditis elegans" > The million mutation project: A new approach to genetics in Caenorhabditis elegans

  • Owen Thompson
  • Mark Edgley
  • Pnina Strasbourger
  • Stephane Flibotte
  • Brent Ewing
  • Ryan Adair Vinci Au Iasha Chaudhry Lisa Fernando Harald Hutter Armelle Kieffer Joanne Lau Norris Lee Angela Miller Greta Raymant Bin Shen Jay Shendure Jon Taylor
  • ... [+13 authors] ...,
  • Emily H. Turner
  • LaDeana W. Hillier
  • Donald G. Moerman
  • Robert H. Waterston
  • First Published June 25, 2013
Method

Mapping functional transcription factor networks from gene expression data

  • Brian C. Haynes
  • Ezekiel J. Maier
  • Michael H. Kramer
  • Patricia I. Wang
  • Holly Brown
  • Michael R. Brent
  • First Published May 1, 2013
Resource

Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines

  • Lucy Cherbas
  • Aarron Willingham
  • Dayu Zhang
  • Li Yang
  • Yi Zou
  • Brian D. Eads Joseph W. Carlson Jane M. Landolin Philipp Kapranov Jacqueline Dumais Anastasia Samsonova Jeong-Hyeon Choi Johnny Roberts Carrie A. Davis Haixu Tang Marijke J. van Baren Srinka Ghosh Alexander Dobin Kim Bell Wei Lin Laura Langton Michael O. Duff Aaron E. Tenney Chris Zaleski Michael R. Brent Roger A. Hoskins Thomas C. Kaufman Justen Andrews Brenton R. Graveley
  • ... [+24 authors] ...,
  • Norbert Perrimon
  • Susan E. Celniker
  • Thomas R. Gingeras
  • Peter Cherbas
  • First Published December 22, 2010
LETTER

Escherichia coli" > Transcription of foreign DNA in Escherichia coli

  • René L. Warren
  • John D. Freeman
  • Roger C. Levesque
  • Duane E. Smailus
  • Stephane Flibotte
  • Robert A. Holt
  • First Published August 13, 2008
Methods

Targeted discovery of novel human exons by comparative genomics

  • Adam Siepel
  • Mark Diekhans
  • Broňa Brejová
  • Laura Langton
  • Michael Stevens
  • Charles L.G. Comstock Colleen Davis Brent Ewing Shelly Oommen Christopher Lau Hung-Chun Yu Jianfeng Li Bruce A. Roe Phil Green
  • ... [+9 authors] ...,
  • Daniela S. Gerhard
  • Gary Temple
  • David Haussler
  • Michael R. Brent
  • First Published November 7, 2007
Methods

Caenorhabditis elegans by array comparative genomic hybridization" > Efficient high-resolution deletion discovery in Caenorhabditis elegans by array comparative genomic hybridization

  • Jason S. Maydan
  • Stephane Flibotte
  • Mark L. Edgley
  • Joanne Lau
  • Rebecca R. Selzer
  • Todd A. Richmond
  • Nathan J. Pofahl
  • James H. Thomas
  • Donald G. Moerman
  • First Published January 31, 2007
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