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Method

Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses

  • First Published February 14, 2020
Method

Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation

  • First Published February 2, 2015
Method

Mapping functional transcription factor networks from gene expression data

  • First Published May 1, 2013
Resource

Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines

  • First Published December 22, 2010
Methods

Targeted discovery of novel human exons by comparative genomics

  • First Published November 7, 2007
Methods

A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices

  • First Published January 8, 2007
RESOURCE

Iterative gene prediction and pseudogene removal improves genome annotation

  • First Published May 1, 2006
PERSPECTIVE

Genome annotation past, present, and future: How to define an ORF at each locus

  • First Published December 8, 2005
RESOURCE

Begin at the beginning: Predicting genes with 5′ UTRs

  • First Published May 2, 2005
RESOURCE

C. elegans ORFeome by cloning TWINSCAN predictions" > Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions

  • First Published April 1, 2005
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