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Method

Verkko2 integrates proximity-ligation data with long-read De Bruijn graphs for efficient telomere-to-telomere genome assembly, phasing, and scaffolding

  • First Published May 19, 2025
Method

Gapless assembly of complete human and plant chromosomes using only nanopore sequencing

  • First Published November 6, 2024
Research

Gaps and complex structurally variant loci in phased genome assemblies

  • First Published May 10, 2023
Method

HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads

  • First Published August 14, 2020
Method

metaSPAdes: a new versatile metagenomic assembler

  • First Published March 15, 2017
Method

Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform" > Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform

  • First Published April 5, 2013
Resource

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

  • First Published November 22, 2011
Research

Drosophila and other metazoa" > Evidence of abundant stop codon readthrough in Drosophila and other metazoa

  • First Published October 12, 2011
Method

Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes

  • First Published October 12, 2011
Resource

The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

  • First Published June 4, 2009
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