Search | Genome Research

Research

Epigenetic characterization of pseudogenes across human tissues

Yunzhe Jiang
Beatrice Borsari
Mark Gerstein

First Published April 15, 2026

Resource

Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships" > Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships

Michelle Kudron
Louis Gevirtzman
Alec Victorsen
Bridget C. Lear
Jiahao Gao
Jinrui Xu Swapna Samanta Emily Frink Adri Tran-Pearson Chau Huynh Dionne Vafeados Ann Hammonds William Fisher Martha Wall Greg Wesseling Vanessa Hernandez Zhichun Lin Mary Kasparian Kevin White Ravi Allada Mark Gerstein
... [+16 authors] ...,
LaDeana Hillier
Susan E. Celniker
Valerie Reinke
Robert H. Waterston

First Published October 22, 2024

Method

A new approach for rare variation collapsing on functional protein domains implicates specific genic regions in ALS

Sahar Gelfman
Sarah Dugger
Cristiane de Araujo Martins Moreno
Zhong Ren
Charles J. Wolock
Neil A. Shneider Hemali Phatnani Elizabeth T. Cirulli Brittany N. Lasseigne Tim Harris Tom Maniatis Guy A. Rouleau Robert H. Brown Aaron D. Gitler Richard M. Myers
... [+10 authors] ...,
Slavé Petrovski
Andrew Allen
David B. Goldstein
Matthew B. Harms

First Published April 2, 2019

Research

Mus caroli and Mus pahari genomes" > Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

David Thybert
Maša Roller
Fábio C.P. Navarro
Ian Fiddes
Ian Streeter
Christine Feig David Martin-Galvez Mikhail Kolmogorov Václav Janoušek Wasiu Akanni Bronwen Aken Sarah Aldridge Varshith Chakrapani William Chow Laura Clarke Carla Cummins Anthony Doran Matthew Dunn Leo Goodstadt Kerstin Howe Matthew Howell Ambre-Aurore Josselin Robert C. Karn Christina M. Laukaitis Lilue Jingtao Fergal Martin Matthieu Muffato Stefanie Nachtweide Michael A. Quail Cristina Sisu Mario Stanke Klara Stefflova Cock Van Oosterhout Frederic Veyrunes Ben Ward Fengtang Yang Golbahar Yazdanifar Amonida Zadissa David J. Adams Alvis Brazma Mark Gerstein Benedict Paten
... [+37 authors] ...,
Son Pham
Thomas M. Keane
Duncan T. Odom
Paul Flicek

First Published March 21, 2018

Method

Inhibition of microRNA 128 promotes excitability of cultured cortical neuronal networks

K. Melodi McSweeney
Ayal B. Gussow
Shelton S. Bradrick
Sarah A. Dugger
Sahar Gelfman
Quanli Wang
... [+1 authors] ...,
Slavé Petrovski
Wayne N. Frankel
Michael J. Boland
David B. Goldstein

First Published August 11, 2016

Research

Enhancer methylation dynamics contribute to cancer plasticity and patient mortality

Rachel E. Bell
Tamar Golan
Danna Sheinboim
Hagar Malcov
David Amar
Avi Salamon Tamar Liron
... [+2 authors] ...,
Sahar Gelfman
Yankel Gabet
Ron Shamir
Carmit Levy

First Published February 23, 2016

Research

Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division

Alexej Abyzov
Rebecca Iskow
Omer Gokcumen
David W. Radke
Suganthi Balasubramanian
Baikang Pei
Lukas Habegger
Charles Lee
Mark Gerstein

First Published September 11, 2013

Research

DNA-methylation effect on cotranscriptional splicing is dependent on GC architecture of the exon–intron structure

Sahar Gelfman
Noa Cohen
Ahuvi Yearim
Gil Ast

First Published March 15, 2013

Research

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

Stephen B. Montgomery
David L. Goode
Erika Kvikstad
Cornelis A. Albers
Zhengdong D. Zhang
Xinmeng Jasmine Mu Guruprasad Ananda Bryan Howie Konrad J. Karczewski Kevin S. Smith Vanessa Anaya Rhea Richardson Joe Davis Daniel G. MacArthur Arend Sidow Laurent Duret Mark Gerstein
... [+12 authors] ...,
Kateryna D. Makova
Jonathan Marchini
Gil McVean
Gerton Lunter

First Published March 11, 2013

Resource

GENCODE: The reference human genome annotation for The ENCODE Project

Jennifer Harrow
Adam Frankish
Jose M. Gonzalez
Electra Tapanari
Mark Diekhans
Felix Kokocinski Bronwen L. Aken Daniel Barrell Amonida Zadissa Stephen Searle If Barnes Alexandra Bignell Veronika Boychenko Toby Hunt Mike Kay Gaurab Mukherjee Jeena Rajan Gloria Despacio-Reyes Gary Saunders Charles Steward Rachel Harte Michael Lin Cédric Howald Andrea Tanzer Thomas Derrien Jacqueline Chrast Nathalie Walters Suganthi Balasubramanian Baikang Pei Michael Tress Jose Manuel Rodriguez Iakes Ezkurdia Jeltje van Baren Michael Brent David Haussler Manolis Kellis Alfonso Valencia
... [+32 authors] ...,
Alexandre Reymond
Mark Gerstein
Roderic Guigó
Tim J. Hubbard

First Published September 5, 2012

Filter results by:

Your search for returned 32 results

Research

Epigenetic characterization of pseudogenes across human tissues

Resource

Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships" > Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships

Method

A new approach for rare variation collapsing on functional protein domains implicates specific genic regions in ALS

Research

Mus caroli and Mus pahari genomes" > Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

Method

Inhibition of microRNA 128 promotes excitability of cultured cortical neuronal networks

Research

Enhancer methylation dynamics contribute to cancer plasticity and patient mortality

Research

Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division

Research

DNA-methylation effect on cotranscriptional splicing is dependent on GC architecture of the exon–intron structure

Research

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

Resource

GENCODE: The reference human genome annotation for The ENCODE Project

Filter results by:

Filter by Author

Filter by Article type

Your search for returned 32 results

Research

Resource

Method

Research

Method

Research

Research

Research

Research

Resource