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Research

Epigenetic characterization of pseudogenes across human tissues

  • First Published April 15, 2026
Resource

Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships" > Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships

  • First Published October 22, 2024
Method

Crunch: integrated processing and modeling of ChIP-seq data in terms of regulatory motifs

  • First Published May 28, 2019
Research

Mus caroli and Mus pahari genomes" > Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

  • First Published March 21, 2018
Method

ISMARA: automated modeling of genomic signals as a democracy of regulatory motifs

  • First Published February 10, 2014
Research

Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division

  • First Published September 11, 2013
Research

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

  • First Published March 11, 2013
Research

Modeling of epigenome dynamics identifies transcription factors that mediate Polycomb targeting

  • First Published September 10, 2012
Resource

GENCODE: The reference human genome annotation for The ENCODE Project

  • First Published September 5, 2012
Research

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

  • First Published September 5, 2012
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