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Research

A systems level predictive model for global gene regulation of methanogenesis in a hydrogenotrophic methanogen

  • Sung Ho Yoon
  • Serdar Turkarslan
  • David J. Reiss
  • Min Pan
  • June A. Burn
  • Kyle C. Costa Thomas J. Lie Joseph Slagel
  • ... [+3 authors] ...,
  • Robert L. Moritz
  • Murray Hackett
  • John A. Leigh
  • Nitin S. Baliga
  • First Published October 2, 2013
Resource

A miRNA-regulatory network explains how dysregulated miRNAs perturb oncogenic processes across diverse cancers

  • Christopher L. Plaisier
  • Min Pan
  • Nitin S. Baliga
  • First Published June 28, 2012
Research

Parallel evolution of transcriptome architecture during genome reorganization

  • Sung Ho Yoon
  • David J. Reiss
  • J. Christopher Bare
  • Dan Tenenbaum
  • Min Pan
  • Joseph Slagel Robert L. Moritz Sujung Lim Murray Hackett Angeli Lal Menon Michael W.W. Adams
  • ... [+6 authors] ...,
  • Adam Barnebey
  • Steven M. Yannone
  • John A. Leigh
  • Nitin S. Baliga
  • First Published July 12, 2011
LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
ARTICLE

A comprehensive ChIP–chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals interchangeable roles of E2F family members

  • Xiaoqin Xu
  • Mark Bieda
  • Victor X. Jin
  • Alina Rabinovich
  • Mathew J. Oberley
  • Roland Green
  • Peggy J. Farnham
  • First Published October 1, 2007
ARTICLE

The anatomy of microbial cell state transitions in response to oxygen

  • Amy K. Schmid
  • David J. Reiss
  • Amardeep Kaur
  • Min Pan
  • Nichole King
  • Phu T. Van
  • Laura Hohmann
  • Daniel B. Martin
  • Nitin S. Baliga
  • First Published September 4, 2007
ARTICLE

A systems view of haloarchaeal strategies to withstand stress from transition metals

  • Amardeep Kaur
  • Min Pan
  • Megan Meislin
  • Marc T. Facciotti
  • Raafat El-Gewely
  • Nitin S. Baliga
  • First Published June 2, 2006
LETTER

Unbiased location analysis of E2F1-binding sites suggests a widespread role for E2F1 in the human genome

  • Mark Bieda
  • Xiaoqin Xu
  • Michael A. Singer
  • Roland Green
  • Peggy J. Farnham
  • First Published April 10, 2006
ARTICLE

Haloarcula marismortui: A halophilic archaeon from the Dead Sea" > Genome sequence of Haloarcula marismortui: A halophilic archaeon from the Dead Sea

  • Nitin S. Baliga
  • Richard Bonneau
  • Marc T. Facciotti
  • Min Pan
  • Gustavo Glusman
  • Eric W. Deutsch Paul Shannon Yulun Chiu Rueyhung Sting Weng Rueichi Richie Gan Pingliang Hung
  • ... [+6 authors] ...,
  • Shailesh V. Date
  • Edward Marcotte
  • Leroy Hood
  • Wailap Victor Ng
  • First Published November 1, 2004
LETTER

Halobacterium NRC-1" > Systems Level Insights Into the Stress Response to UV Radiation in the Halophilic Archaeon Halobacterium NRC-1

  • Nitin S. Baliga
  • Sarah J. Bjork
  • Richard Bonneau
  • Min Pan
  • Chika Iloanusi
  • Molly C.H. Kottemann
  • Leroy Hood
  • Jocelyne DiRuggiero
  • First Published May 12, 2004
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