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Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Resource

Drosophila melanogaster genome" > The Release 6 reference sequence of the Drosophila melanogaster genome

  • Roger A. Hoskins
  • Joseph W. Carlson
  • Kenneth H. Wan
  • Soo Park
  • Ivonne Mendez
  • Samuel E. Galle Benjamin W. Booth Barret D. Pfeiffer Reed A. George Robert Svirskas Martin Krzywinski Jacqueline Schein Maria Carmela Accardo Elisabetta Damia Giovanni Messina María Méndez-Lago Beatriz de Pablos Olga V. Demakova Evgeniya N. Andreyeva Lidiya V. Boldyreva Marco Marra A. Bernardo Carvalho Patrizio Dimitri Alfredo Villasante
  • ... [+19 authors] ...,
  • Igor F. Zhimulev
  • Gerald M. Rubin
  • Gary H. Karpen
  • Susan E. Celniker
  • First Published January 14, 2015
Resource

D. melanogaster modENCODE transcriptome annotation" > Comparative validation of the D. melanogaster modENCODE transcriptome annotation

  • Zhen-Xia Chen
  • David Sturgill
  • Jiaxin Qu
  • Huaiyang Jiang
  • Soo Park
  • Nathan Boley Ana Maria Suzuki Anthony R. Fletcher David C. Plachetzki Peter C. FitzGerald Carlo G. Artieri Joel Atallah Olga Barmina James B. Brown Kerstin P. Blankenburg Emily Clough Abhijit Dasgupta Sai Gubbala Yi Han Joy C. Jayaseelan Divya Kalra Yoo-Ah Kim Christie L. Kovar Sandra L. Lee Mingmei Li James D. Malley John H. Malone Tittu Mathew Nicolas R. Mattiuzzo Mala Munidasa Donna M. Muzny Fiona Ongeri Lora Perales Teresa M. Przytycka Ling-Ling Pu Garrett Robinson Rebecca L. Thornton Nehad Saada Steven E. Scherer Harold E. Smith Charles Vinson Crystal B. Warner Kim C. Worley Yuan-Qing Wu Xiaoyan Zou Peter Cherbas Manolis Kellis Michael B. Eisen Fabio Piano Karin Kionte David H. Fitch Paul W. Sternberg Asher D. Cutter Michael O. Duff Roger A. Hoskins Brenton R. Graveley Richard A. Gibbs Peter J. Bickel Artyom Kopp
  • ... [+54 authors] ...,
  • Piero Carninci
  • Susan E. Celniker
  • Brian Oliver
  • Stephen Richards
  • First Published July 1, 2014
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
12 | Genomes/Letter

Drosophila melanogaster using 12 fly genomes" > Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes

  • Michael F. Lin
  • Joseph W. Carlson
  • Madeline A. Crosby
  • Beverley B. Matthews
  • Charles Yu
  • Soo Park Kenneth H. Wan Andrew J. Schroeder L. Sian Gramates Susan E. St. Pierre Margaret Roark Kenneth L. Wiley Rob J. Kulathinal Peili Zhang Kyl V. Myrick
  • ... [+10 authors] ...,
  • Jerry V. Antone
  • Susan E. Celniker
  • William M. Gelbart
  • Manolis Kellis
  • First Published November 7, 2007
LETTER

Monodelphis domestica" > Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

  • Andrew J. Gentles
  • Matthew J. Wakefield
  • Oleksiy Kohany
  • Wanjun Gu
  • Mark A. Batzer
  • David D. Pollock
  • Jerzy Jurka
  • First Published May 10, 2007
LETTER

Alu amplification" > Under the genomic radar: The Stealth model of Alu amplification

  • Kyudong Han
  • Jinchuan Xing
  • Hui Wang
  • Dale J. Hedges
  • Randall K. Garber
  • Richard Cordaux
  • Mark A. Batzer
  • First Published May 2, 2005
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