Method
Analyzing rare mutations in metagenomes assembled using long and accurate reads
- First Published November 23, 2022
Method
Fast and accurate mapping of long reads to complete genome assemblies with VerityMap
- First Published November 15, 2022
Method
Variations in antibody repertoires correlate with vaccine responses
- First Published March 31, 2022
Research
V(DD)J recombination is an important and evolutionarily conserved mechanism for generating antibodies with unusually long CDR3s
- First Published September 18, 2020
Method
BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs
- First Published June 3, 2019
Method
Plasmid detection and assembly in genomic and metagenomic data sets
- First Published May 2, 2019
Method
Detection and analysis of ancient segmental duplications in mammalian genomes
- First Published May 7, 2018
Research
Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome
- First Published February 25, 2016
Method
Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform" > Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform
- First Published April 5, 2013
Perspective
Reading TE leaves: New approaches to the identification of transposable element insertions
- First Published June 1, 2011
Letter
5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome
- First Published August 3, 2009
Letter
Mobile elements create structural variation: Analysis of a complete human genome
- First Published May 13, 2009
RESOURCE
De novo fragment assembly with short mate-paired reads: Does the read length matter?
- First Published December 3, 2008
Methods
Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes
- First Published April 21, 2008
Methods
Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation
- First Published August 9, 2007
LETTER
Monodelphis domestica" > Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica
- First Published May 10, 2007
Forum
The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction
- First Published March 1, 2006
LETTER
Alu amplification" > Under the genomic radar: The Stealth model of Alu amplification
- First Published May 2, 2005
Chicken Special/Letters
Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages
- First Published December 8, 2004
LETTER
Alu repeat elements reveals complex evolutionary history" > Whole-genome analysis of Alu repeat elements reveals complex evolutionary history
- First Published November 1, 2004
ARTICLE
Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes
- First Published April 1, 2004
LETTER
Alu Insertion Polymorphisms" > Genetic Variation Among World Populations: Inferences From 100 Alu Insertion Polymorphisms
- First Published June 12, 2003
LETTER
Y Chromosome STR Haplotypes and the Genetic Structure of U.S. Populations of African, European, and Hispanic Ancestry
- First Published April 1, 2003
LETTER
Patterns of Human Diversity, within and among Continents, Inferred from Biallelic DNA Polymorphisms
- First Published April 1, 2002
LETTER
Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species
- First Published January 1, 2002
METHODS
Efficiency of Database Search for Identification of Mutated and Modified Proteins via Mass Spectrometry
- First Published February 1, 2001
LETTER
Reading between the LINEs: Human Genomic Variation Induced by LINE-1 Retrotransposition
- First Published October 1, 2000
ARTICLE
Potential Gene Conversion and Source Genes for Recently Integrated Alu Elements
- First Published October 1, 2000