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Method

Detection of long repeat expansions from PCR-free whole-genome sequence data

  • Egor Dolzhenko
  • Joke J.F.A. van Vugt
  • Richard J. Shaw
  • Mitchell A. Bekritsky
  • Marka van Blitterswijk
  • Giuseppe Narzisi Subramanian S. Ajay Vani Rajan Bryan R. Lajoie Nathan H. Johnson Zoya Kingsbury Sean J. Humphray Raymond D. Schellevis William J. Brands Matt Baker Rosa Rademakers Maarten Kooyman Gijs H.P. Tazelaar Michael A. van Es Russell McLaughlin William Sproviero Aleksey Shatunov Ashley Jones Ahmad Al Khleifat Alan Pittman Sarah Morgan Orla Hardiman Ammar Al-Chalabi Chris Shaw Bradley Smith Edmund J. Neo Karen Morrison Pamela J. Shaw Catherine Reeves Lara Winterkorn Nancy S. Wexler David E. Housman Christopher W. Ng Alina L. Li Ryan J. Taft
  • ... [+35 authors] ...,
  • Leonard H. van den Berg
  • David R. Bentley
  • Jan H. Veldink
  • Michael A. Eberle
  • First Published September 8, 2017
Resource

A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree

  • Michael A. Eberle
  • Epameinondas Fritzilas
  • Peter Krusche
  • Morten Källberg
  • Benjamin L. Moore
  • Mitchell A. Bekritsky Zamin Iqbal Han-Yu Chuang Sean J. Humphray Aaron L. Halpern
  • ... [+5 authors] ...,
  • Semyon Kruglyak
  • Elliott H. Margulies
  • Gil McVean
  • David R. Bentley
  • First Published November 30, 2016
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Letter

Mobile elements create structural variation: Analysis of a complete human genome

  • Jinchuan Xing
  • Yuhua Zhang
  • Kyudong Han
  • Abdel Halim Salem
  • Shurjo K. Sen
  • Chad D. Huff Qiong Zhou
  • ... [+2 authors] ...,
  • Ewen F. Kirkness
  • Samuel Levy
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published May 13, 2009
LETTER

Monodelphis domestica" > Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

  • Andrew J. Gentles
  • Matthew J. Wakefield
  • Oleksiy Kohany
  • Wanjun Gu
  • Mark A. Batzer
  • David D. Pollock
  • Jerzy Jurka
  • First Published May 10, 2007
LETTER

Genomic regions exhibiting positive selection identified from dense genotype data

  • Christopher S. Carlson
  • Daryl J. Thomas
  • Michael A. Eberle
  • Johanna E. Swanson
  • Robert J. Livingston
  • Mark J. Rieder
  • Deborah A. Nickerson
  • First Published October 26, 2005
LETTER

Alu amplification" > Under the genomic radar: The Stealth model of Alu amplification

  • Kyudong Han
  • Jinchuan Xing
  • Hui Wang
  • Dale J. Hedges
  • Randall K. Garber
  • Richard Cordaux
  • Mark A. Batzer
  • First Published May 2, 2005
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