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Method

Genome-wide dynamics of RNA synthesis, processing, and degradation without RNA metabolic labeling

  • Mattia Furlan
  • Eugenia Galeota
  • Nunzio Del Gaudio
  • Erik Dassi
  • Michele Caselle
  • Stefano de Pretis
  • Mattia Pelizzola
  • First Published September 25, 2020
Research

Integrative analysis of RNA polymerase II and transcriptional dynamics upon MYC activation

  • Stefano de Pretis
  • Theresia R. Kress
  • Marco J. Morelli
  • Arianna Sabò
  • Chiara Locarno
  • Alessandro Verrecchia
  • ... [+1 authors] ...,
  • Mirko Doni
  • Stefano Campaner
  • Bruno Amati
  • Mattia Pelizzola
  • First Published September 13, 2017
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Method

Degradation dynamics of microRNAs revealed by a novel pulse-chase approach

  • Matteo J. Marzi
  • Francesco Ghini
  • Benedetta Cerruti
  • Stefano de Pretis
  • Paola Bonetti
  • Chiara Giacomelli Marcin M. Gorski Theresia Kress
  • ... [+3 authors] ...,
  • Mattia Pelizzola
  • Heiko Muller
  • Bruno Amati
  • Francesco Nicassio
  • First Published January 28, 2016
Research

cis-mediated silencing in somatic cells" > Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells

  • Timothy J. Looney
  • Li Zhang
  • Chih-Hsin Chen
  • Jae Hyun Lee
  • Sheila Chari
  • Frank Fuxiang Mao Mattia Pelizzola Lu Zhang Ryan Lister Samuel W. Baker Croydon J. Fernandes Jedidiah Gaetz Kara M. Foshay Kayla L. Clift Zhenyu Zhang Wei-Qiang Li Eric J. Vallender Ulrich Wagner Jane Yuxia Qin Katelyn J. Michelini Branimir Bugarija Donghyun Park Emmanuel Aryee Thomas Stricker Jie Zhou Kevin P. White Bing Ren
  • ... [+22 authors] ...,
  • Gary P. Schroth
  • Joseph R. Ecker
  • Andy Peng Xiang
  • Bruce T. Lahn
  • First Published December 5, 2013
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Research

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

  • Gary C. Hon
  • R. David Hawkins
  • Otavia L. Caballero
  • Christine Lo
  • Ryan Lister
  • Mattia Pelizzola Armand Valsesia Zhen Ye Samantha Kuan Lee E. Edsall Anamaria Aranha Camargo Brian J. Stevenson Joseph R. Ecker
  • ... [+8 authors] ...,
  • Vineet Bafna
  • Robert L. Strausberg
  • Andrew J. Simpson
  • Bing Ren
  • First Published December 7, 2011
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
Methods

Genome-wide screen of promoter methylation identifies novel markers in melanoma

  • Yasuo Koga
  • Mattia Pelizzola
  • Elaine Cheng
  • Michael Krauthammer
  • Mario Sznol
  • Stephan Ariyan
  • ... [+1 authors] ...,
  • Deepak Narayan
  • Annette M. Molinaro
  • Ruth Halaban
  • Sherman M. Weissman
  • First Published June 2, 2009
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