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Research

Alu insertion variants alter gene transcript levels" > Alu insertion variants alter gene transcript levels

  • Lindsay M. Payer
  • Jared P. Steranka
  • Maria S. Kryatova
  • Giacomo Grillo
  • Mathieu Lupien
  • Pedro P. Rocha
  • Kathleen H. Burns
  • First Published November 19, 2021
Method

cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks" > Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks

  • Seyed Ali Madani Tonekaboni
  • Parisa Mazrooei
  • Victor Kofia
  • Benjamin Haibe-Kains
  • Mathieu Lupien
  • First Published September 18, 2019
Research

High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma

  • Michael J. Johnston
  • Ana Nikolic
  • Nicoletta Ninkovic
  • Paul Guilhamon
  • Florence M.G. Cavalli
  • Steven Seaman Franz J. Zemp John Lee Aly Abdelkareem Katrina Ellestad Alex Murison Michelle M. Kushida Fiona J. Coutinho Yussanne Ma Andrew J. Mungall Richard Moore Marco A. Marra Michael D. Taylor Peter B. Dirks Trevor J. Pugh Sorana Morrissy
  • ... [+16 authors] ...,
  • Bradley St Croix
  • Douglas J. Mahoney
  • Mathieu Lupien
  • Marco Gallo
  • First Published June 27, 2019
Research

cis-regulatory modules controlling liver functions" > The logic of transcriptional regulator recruitment architecture at cis-regulatory modules controlling liver functions

  • Julie Dubois-Chevalier
  • Vanessa Dubois
  • Hélène Dehondt
  • Parisa Mazrooei
  • Claire Mazuy
  • Aurélien A. Sérandour Céline Gheeraert Penderia Guillaume Eric Baugé Bruno Derudas Nathalie Hennuyer Réjane Paumelle Guillemette Marot Jason S. Carroll
  • ... [+9 authors] ...,
  • Mathieu Lupien
  • Bart Staels
  • Philippe Lefebvre
  • Jérôme Eeckhoute
  • First Published April 11, 2017
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Research

Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits

  • Olivia Corradin
  • Alina Saiakhova
  • Batool Akhtar-Zaidi
  • Lois Myeroff
  • Joseph Willis
  • Richard Cowper-Sal·lari
  • Mathieu Lupien
  • Sanford Markowitz
  • Peter C. Scacheri
  • First Published November 6, 2013
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Research

SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus" > Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus

  • Xiaoyang Zhang
  • Richard Cowper-Sal·lari
  • Swneke D. Bailey
  • Jason H. Moore
  • Mathieu Lupien
  • First Published June 4, 2012
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Research

XIST locus" > Comparative analysis of the primate X-inactivation center region and reconstruction of the ancestral primate XIST locus

  • Julie E. Horvath
  • Christina B. Sheedy
  • Stephanie L. Merrett
  • Abdoulaye Banire Diallo
  • David L. Swofford
  • NISC Comparative Sequencing Program
  • Eric D. Green
  • Huntington F. Willard
  • First Published April 25, 2011
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