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Research

Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages" > Sequence analysis in Bos taurus reveals pervasiveness of X–Y arms races in mammalian lineages

  • First Published November 18, 2020
Corrigendum

Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data

  • First Published January 2, 2018
Corrigendum

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

  • First Published September 1, 2017
Resource

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

  • First Published April 10, 2017
Research

Discovery and genotyping of structural variation from long-read haploid genome sequence data

  • First Published November 28, 2016
Research

Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region

  • First Published October 7, 2016
Research

Pangolin genomes and the evolution of mammalian scales and immunity

  • First Published August 10, 2016
Research

Great ape Y Chromosome and mitochondrial DNA phylogenies reflect subspecies structure and patterns of mating and dispersal

  • First Published February 16, 2016
Method

INTEGRATE: gene fusion discovery using whole genome and transcriptome data

  • First Published November 10, 2015
Resource

Chlorocebus aethiops sabaeus)" > The genome of the vervet (Chlorocebus aethiops sabaeus)

  • First Published September 16, 2015
Resource

Single haplotype assembly of the human genome from a hydatidiform mole

  • First Published November 4, 2014
Resource

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline

  • First Published March 27, 2014
Method

Reconstructing complex regions of genomes using long-read sequencing technology

  • First Published January 13, 2014
Resource

A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons

  • First Published August 14, 2012
Resource

MuSiC: Identifying mutational significance in cancer genomes

  • First Published July 3, 2012
Research

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

  • First Published March 14, 2012
Resource

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

  • First Published February 2, 2012
Research

Copy number variation analysis in the great apes reveals species-specific patterns of structural variation

  • First Published August 8, 2011
Research

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

  • First Published June 17, 2011
Research

Gene amplification as double minutes or homogeneously staining regions in solid tumors: Origin and structure

  • First Published July 14, 2010
Letter

Evolutionary descent of a human chromosome 6 neocentromere: A jump back to 17 million years ago

  • First Published May 1, 2009
LETTER

Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

  • First Published November 24, 2008
RESOURCE

Haplotype sorting using human fosmid clone end-sequence pairs

  • First Published October 3, 2008
RESOURCE

Hylobates and Nomascus Gibbons by high-resolution synteny mapping" > Tracking the complex flow of chromosome rearrangements from the Hominoidea Ancestor to extant Hylobates and Nomascus Gibbons by high-resolution synteny mapping

  • First Published June 13, 2008
ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • First Published June 13, 2007
RESOURCE

PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data

  • First Published April 6, 2007
RESOURCE

Molecular refinement of gibbon genome rearrangements

  • First Published December 21, 2006
PERSPECTIVE

Ancestral genomes reconstruction: An integrated, multi-disciplinary approach is needed

  • First Published October 19, 2006
Methods

Physical map-assisted whole-genome shotgun sequence assemblies

  • First Published June 1, 2006
LETTER

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

  • First Published April 10, 2006
LETTER

A genome-wide survey of structural variation between human and chimpanzee

  • First Published September 16, 2005
ARTICLE

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

  • First Published July 15, 2005
LETTER

Punctuated duplication seeding events during the evolution of human chromosome 2p11

  • First Published June 17, 2005
RESOURCE

EAnnot: A genome annotation tool using experimental evidence

  • First Published December 1, 2004
LETTER

Analysis of Human mRNAs With the Reference Genome Sequence Reveals Potential Errors, Polymorphisms, and RNA Editing

  • First Published October 15, 2004
LETTER

Recurrent Sites for New Centromere Seeding

  • First Published September 1, 2004
LETTER

Insertion of Telomeric Repeats at Intrachromosomal Break Sites During Primate Evolution

  • First Published August 12, 2004
Chicken Special/Letters

The repetitive landscape of the chicken genome

  • First Published July 15, 2004
ARTICLE

Analysis of Segmental Duplications and Genome Assembly in the Mouse

  • First Published May 3, 2004
LETTER

Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)

  • First Published January 14, 2003
LETTER

Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25

  • First Published January 1, 2003
INSIGHT/OUTLOOK

What is Finished, and Why Does it Matter

  • First Published May 1, 2002
LETTER

KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms" > Human Paralogs of KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms

  • First Published January 1, 2002
LETTER

Centromere Emergence in Evolution

  • First Published April 1, 2001
METHODS

Theories and Applications for Sequencing Randomly Selected Clones

  • First Published January 18, 2001
LETTER

Centromere Repositioning

  • First Published December 1, 1999
ARTICLE

CAGGG Repeats and the Pericentromeric Duplication of the Hominoid Genome

  • First Published November 1, 1999
ARTICLE

Extreme Reduction of Chromosome-Specific α-Satellite Array Is Unusually Common in Human Chromosome 21

  • First Published October 1, 1999
LETTER

A Pneumatic Device for Rapid Loading of DNA Sequencing Gels

  • First Published May 1, 1998
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