Search | Genome Research

CL_GR_GenSeq_728x90

Your search for returned 26 results

Research

Yeast genetic interaction screen of human genes associated with amyotrophic lateral sclerosis: identification of MAP2K5 kinase as a potential drug target

Myungjin Jo
Ah Young Chung
Nozomu Yachie
Minchul Seo
Hyejin Jeon
Youngpyo Nam Yeojin Seo Eunmi Kim Quan Zhong
... [+4 authors] ...,
Marc Vidal
Hae Chul Park
Frederick P. Roth
Kyoungho Suk

First Published June 8, 2017

Method

An extended set of yeast-based functional assays accurately identifies human disease mutations

Song Sun
Fan Yang
Guihong Tan
Michael Costanzo
Rose Oughtred
Jodi Hirschman Chandra L. Theesfeld Pritpal Bansal Nidhi Sahni Song Yi Analyn Yu Tanya Tyagi Cathy Tie David E. Hill Marc Vidal
... [+10 authors] ...,
Brenda J. Andrews
Charles Boone
Kara Dolinski
Frederick P. Roth

First Published March 14, 2016

Resource

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

Andrea Pauli
Eivind Valen
Michael F. Lin
Manuel Garber
Nadine L. Vastenhouw
Joshua Z. Levin Lin Fan
... [+2 authors] ...,
Albin Sandelin
John L. Rinn
Aviv Regev
Alexander F. Schier

First Published November 22, 2011

Research

Drosophila and other metazoa" > Evidence of abundant stop codon readthrough in Drosophila and other metazoa

Irwin Jungreis
Michael F. Lin
Rebecca Spokony
Clara S. Chan
Nicolas Negre
Alec Victorsen
Kevin P. White
Manolis Kellis

First Published October 12, 2011

Method

Locating protein-coding sequences under selection for additional, overlapping functions in 29 mammalian genomes

Michael F. Lin
Pouya Kheradpour
Stefan Washietl
Brian J. Parker
Jakob S. Pedersen
Manolis Kellis

First Published October 12, 2011

Resource

C. elegans ORFeome" > Large-scale RACE approach for proactive experimental definition of C. elegans ORFeome

Kourosh Salehi-Ashtiani
Chenwei Lin
Tong Hao
Yun Shen
David Szeto
Xinping Yang Lila Ghamsari HanJoo Lee Changyu Fan Ryan R. Murray Stuart Milstein Nenad Svrzikapa
... [+7 authors] ...,
Michael E. Cusick
Frederick P. Roth
David E. Hill
Marc Vidal

First Published October 2, 2009

Resource

Analysis of the human E2 ubiquitin conjugating enzyme protein interaction network

Gabriel Markson
Christina Kiel
Russell Hyde
Stephanie Brown
Panagoula Charalabous
Anja Bremm Jennifer Semple Jonathan Woodsmith Simon Duley Kourosh Salehi-Ashtiani Marc Vidal
... [+6 authors] ...,
David Komander
Luis Serrano
Paul Lehner
Christopher M. Sanderson

First Published June 23, 2009

Resource

The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

Kim D. Pruitt
Jennifer Harrow
Rachel A. Harte
Craig Wallin
Mark Diekhans
Donna R. Maglott Steve Searle Catherine M. Farrell Jane E. Loveland Barbara J. Ruef Elizabeth Hart Marie-Marthe Suner Melissa J. Landrum Bronwen Aken Sarah Ayling Robert Baertsch Julio Fernandez-Banet Joshua L. Cherry Val Curwen Michael DiCuccio Manolis Kellis Jennifer Lee Michael F. Lin Michael Schuster Andrew Shkeda Clara Amid Garth Brown Oksana Dukhanina Adam Frankish Jennifer Hart Bonnie L. Maidak Jonathan Mudge Michael R. Murphy Terence Murphy Jeena Rajan Bhanu Rajput Lillian D. Riddick Catherine Snow Charles Steward David Webb Janet A. Weber Laurens Wilming Wenyu Wu Ewan Birney David Haussler
... [+40 authors] ...,
Tim Hubbard
James Ostell
Richard Durbin
David Lipman

First Published June 4, 2009

Methods

Shifted Transversal Design smart-pooling for high coverage interactome mapping

Xiaofeng Xin
Jean-François Rual
Tomoko Hirozane-Kishikawa
David E. Hill
Marc Vidal
Charles Boone
Nicolas Thierry-Mieg

First Published May 15, 2009

LETTER

Saccharomyces cerevisiae predicted ORFeome" > Revisiting the Saccharomyces cerevisiae predicted ORFeome

Qian-Ru Li
Anne-Ruxandra Carvunis
Haiyuan Yu
Jing-Dong J. Han
Quan Zhong
Nicolas Simonis Stanley Tam Tong Hao Niels J. Klitgord Denis Dupuy Danny Mou Ilan Wapinski
... [+7 authors] ...,
Aviv Regev
David E. Hill
Michael E. Cusick
Marc Vidal

First Published May 23, 2008

12 | Genomes/Letter

Drosophila melanogaster using 12 fly genomes" > Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes

Michael F. Lin
Joseph W. Carlson
Madeline A. Crosby
Beverley B. Matthews
Charles Yu
Soo Park Kenneth H. Wan Andrew J. Schroeder L. Sian Gramates Susan E. St. Pierre Margaret Roark Kenneth L. Wiley Rob J. Kulathinal Peili Zhang Kyl V. Myrick
... [+10 authors] ...,
Jerry V. Antone
Susan E. Celniker
William M. Gelbart
Manolis Kellis

First Published November 7, 2007

RESOURCE

C. elegans ORFeome by cloning TWINSCAN predictions" > Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions

Chaochun Wei
Philippe Lamesch
Manimozhiyan Arumugam
Jennifer Rosenberg
Ping Hu
Marc Vidal
Michael R. Brent

First Published April 1, 2005

LETTER

C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones" > New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones

Anita G. Fernandez
Kristin C. Gunsalus
Jerry Huang
Ling-Shiang Chuang
Nancy Ying
Hsiao-lan Liang Caroline Tang Aaron J. Schetter Charles Zegar Jean-François Rual
... [+5 authors] ...,
David E. Hill
Valerie Reinke
Marc Vidal
Fabio Piano

First Published February 1, 2005

LETTER

Caenorhabditis elegans Using a MultiSite Gateway Recombination System" > Feasibility of Genome-Scale Construction of Promoter::Reporter Gene Fusions for Expression in Caenorhabditis elegans Using a MultiSite Gateway Recombination System

Ian A. Hope
Jonathan Stevens
Anna Garner
Josie Hayes
David L. Cheo
Michael A. Brasch
Marc Vidal

First Published October 15, 2004

RESOURCE

Caenorhabditis elegans Promoterome" > A First Version of the Caenorhabditis elegans Promoterome

Denis Dupuy
Qian-Ru Li
Bart Deplancke
Mike Boxem
Tong Hao
Philippe Lamesch Reynaldo Sequerra Stephanie Bosak Lynn Doucette-Stamm
... [+4 authors] ...,
Ian A. Hope
David E. Hill
Albertha J.M. Walhout
Marc Vidal

First Published October 15, 2004

PERSPECTIVE

ORFeome Cloning and Systems Biology: Standardized Mass Production of the Parts From the Parts-List

Michael A. Brasch
James L. Hartley
Marc Vidal

First Published October 15, 2004

Insight/Outlook

Academia-Industry Collaboration: An Integral Element for Building “Omic” Resources

David E. Hill
Michael A. Brasch
Anthony A. del Campo
Lynn Doucette-Stamm
James I. Garrels
Judith Glaven
... [+1 authors] ...,
James L. Hartley
James R. Hudson
Troy Moore
Marc Vidal

First Published October 15, 2004

RESOURCE

Human ORFeome Version 1.1: A Platform for Reverse Proteomics

Jean-François Rual
Tomoko Hirozane-Kishikawa
Tong Hao
Nicolas Bertin
Siming Li
Amélie Dricot Ning Li Jennifer Rosenberg Philippe Lamesch Pierre-Olivier Vidalain Tracey R. Clingingsmith James L. Hartley Dominic Esposito David Cheo Troy Moore Blake Simmons Reynaldo Sequerra Stephanie Bosak Lynn Doucette-Stamm Christian Le Peuch Jean Vandenhaute
... [+16 authors] ...,
Michael E. Cusick
Joanna S. Albala
David E. Hill
Marc Vidal

First Published October 15, 2004

RESOURCE

Brucella melitensis ORFeome Version 1.1" > Generation of the Brucella melitensis ORFeome Version 1.1

Amélie Dricot
Jean-François Rual
Philippe Lamesch
Nicolas Bertin
Denis Dupuy
Tong Hao Christophe Lambert Régis Hallez Jean-Marc Delroisse Jean Vandenhaute Ignacio Lopez-Goñi Ignacio Moriyon Juan M. Garcia-Lobo Félix J. Sangari Alastair P. MacMillan Sally J. Cutler Adrian M. Whatmore Stephanie Bozak Reynaldo Sequerra Lynn Doucette-Stamm
... [+15 authors] ...,
Marc Vidal
David E. Hill
Jean-Jacques Letesson
Xavier De Bolle

First Published October 15, 2004

Methods

A Gateway-Compatible Yeast One-Hybrid System

Bart Deplancke
Denis Dupuy
Marc Vidal
Albertha J.M. Walhout

First Published October 15, 2004

RESOURCE

Caenorhabditis elegans Phenome Mapping With an ORFeome-Based RNAi Library" > Toward Improving Caenorhabditis elegans Phenome Mapping With an ORFeome-Based RNAi Library

Jean-François Rual
Julian Ceron
John Koreth
Tong Hao
Anne-Sophie Nicot
Tomoko Hirozane-Kishikawa Jean Vandenhaute
... [+2 authors] ...,
Stuart H. Orkin
David E. Hill
Sander van den Heuvel
Marc Vidal

First Published October 15, 2004

Methods

C. elegans Proteins" > High-Throughput Expression of C. elegans Proteins

Chi-Hao Luan
Shihong Qiu
James B. Finley
Mike Carson
Rita J. Gray
Wenying Huang David Johnson Jun Tsao Jérôme Reboul Philippe Vaglio
... [+5 authors] ...,
David E. Hill
Marc Vidal
Lawrence J. DeLucas
Ming Luo

First Published October 15, 2004

LETTER

C. elegans ORFeome Version 3.1: Increasing the Coverage of ORFeome Resources With Improved Gene Predictions" > C. elegans ORFeome Version 3.1: Increasing the Coverage of ORFeome Resources With Improved Gene Predictions

Philippe Lamesch
Stuart Milstein
Tong Hao
Jennifer Rosenberg
Ning Li
Reynaldo Sequerra Stephanie Bosak
... [+2 authors] ...,
Lynn Doucette-Stamm
Jean Vandenhaute
David E. Hill
Marc Vidal

First Published October 15, 2004

Methods

Annotation Transfer Between Genomes: Protein–Protein Interologs and Protein–DNA Regulogs

Haiyuan Yu
Nicholas M. Luscombe
Hao Xin Lu
Xiaowei Zhu
Yu Xia
Jing-Dong J. Han
... [+1 authors] ...,
Nicolas Bertin
Sambath Chung
Marc Vidal
Mark Gerstein

First Published June 1, 2004

METHODS

Identification of Potential Interaction Networks Using Sequence-Based Searches for Conserved Protein-Protein Interactions or “Interologs”

Lisa R. Matthews
Philippe Vaglio
Jérôme Reboul
Hui Ge
Brian P. Davis
James Garrels
Sylvie Vincent
Marc Vidal

First Published December 1, 2001

METHODS

A Genetic Strategy to Eliminate Self-Activator Baits Prior to High-Throughput Yeast Two-Hybrid Screens

Albertha J.M. Walhout
Marc Vidal

First Published November 1, 1999