Search | Genome Research

Single-cell template strand sequencing reveals culture-induced chromosomal instability in a gibbon cell line

Alessia Daponte
Gerardina Chirico
Annalisa Paparella
Annalaura Montanari
Caterina Manzari
Martina Macino Oliver Dionisi Dyck Francesco De Leonardis Flavia Angela Maria Maggiolini Alberto L'Abbate Francesco Montinaro Sandra Louzada
... [+7 authors] ...,
Mario Ventura
Ashley D. Sanders
Francesca Antonacci
Claudia Rita Catacchio

First Published May 4, 2026

A high-resolution map of small-scale inversions in the gibbon genome

Ludovica Mercuri
Donato Palmisano
Alberto L'Abbate
Pietro D'Addabbo
Francesco Montinaro
Claudia Rita Catacchio Patrick Hasenfeld Mario Ventura
... [+3 authors] ...,
Jan O. Korbel
Ashley D. Sanders
Flavia Angela Maria Maggiolini
Francesca Antonacci

First Published September 30, 2022

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

Flavia Angela Maria Maggiolini
Ashley D. Sanders
Colin James Shew
Arvis Sulovari
Yafei Mao
Marta Puig Claudia Rita Catacchio Maria Dellino Donato Palmisano Ludovica Mercuri Miriana Bitonto David Porubský Mario Cáceres Evan E. Eichler
... [+9 authors] ...,
Mario Ventura
Megan Y. Dennis
Jan O. Korbel
Francesca Antonacci

First Published October 22, 2020

Inversion variants in human and primate genomes

Claudia Rita Catacchio
Flavia Angela Maria Maggiolini
Pietro D'Addabbo
Miriana Bitonto
Oronzo Capozzi
Martina Lepore Signorile Mattia Miroballo
... [+2 authors] ...,
Nicoletta Archidiacono
Evan E. Eichler
Mario Ventura
Francesca Antonacci

First Published May 18, 2018

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

Mario Ventura
Claudia R. Catacchio
Saba Sajjadian
Laura Vives
Peter H. Sudmant
Tomas Marques-Bonet
Tina A. Graves
Richard K. Wilson
Evan E. Eichler

First Published September 1, 2017

Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region

Kiana Mohajeri
Stuart Cantsilieris
John Huddleston
Bradley J. Nelson
Bradley P. Coe
Catarina D. Campbell Carl Baker Lana Harshman Katherine M. Munson Zev N. Kronenberg Milinn Kremitzki Archana Raja Claudia Rita Catacchio
... [+8 authors] ...,
Tina A. Graves
Richard K. Wilson
Mario Ventura
Evan E. Eichler

First Published October 7, 2016

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis

Catia Attanasio
Alex S. Nord
Yiwen Zhu
Matthew J. Blow
Simon C. Biddie
Eric M. Mendenhall Jesse Dixon Crystal Wright Roya Hosseini Jennifer A. Akiyama Amy Holt Ingrid Plajzer-Frick Malak Shoukry Veena Afzal Bing Ren
... [+10 authors] ...,
Bradley E. Bernstein
Edward M. Rubin
Axel Visel
Len A. Pennacchio

First Published April 21, 2014

Hominoid fission of chromosome 14/15 and the role of segmental duplications

Giuliana Giannuzzi
Michele Pazienza
John Huddleston
Francesca Antonacci
Maika Malig
Laura Vives
Evan E. Eichler
Mario Ventura

First Published September 27, 2013

Evolution and diversity of copy number variation in the great ape lineage

Peter H. Sudmant
John Huddleston
Claudia R. Catacchio
Maika Malig
LaDeana W. Hillier
Carl Baker Kiana Mohajeri Ivanela Kondova Ronald E. Bontrop Stephan Persengiev Francesca Antonacci
... [+6 authors] ...,
Mario Ventura
Javier Prado-Martinez
Tomas Marques-Bonet
Evan E. Eichler

First Published July 3, 2013

LRRC37 gene family" > Evolutionary dynamism of the primate LRRC37 gene family

Giuliana Giannuzzi
Priscillia Siswara
Maika Malig
Tomas Marques-Bonet
James C. Mullikin
Mario Ventura
Evan E. Eichler

First Published October 11, 2012

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

Mario Ventura
Claudia R. Catacchio
Saba Sajjadian
Laura Vives
Peter H. Sudmant
Tomas Marques-Bonet
Tina A. Graves
Richard K. Wilson
Evan E. Eichler

First Published March 14, 2012

Copy number variation of individual cattle genomes using next-generation sequencing

Derek M. Bickhart
Yali Hou
Steven G. Schroeder
Can Alkan
Maria Francesca Cardone
Lakshmi K. Matukumalli Jiuzhou Song Robert D. Schnabel Mario Ventura Jeremy F. Taylor Jose Fernando Garcia
... [+6 authors] ...,
Curtis P. Van Tassell
Tad S. Sonstegard
Evan E. Eichler
George E. Liu

First Published February 2, 2012

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

Mario Ventura
Claudia R. Catacchio
Can Alkan
Tomas Marques-Bonet
Saba Sajjadian
Tina A. Graves Fereydoun Hormozdiari Arcadi Navarro Maika Malig Carl Baker Choli Lee Emily H. Turner Lin Chen Jeffrey M. Kidd
... [+9 authors] ...,
Nicoletta Archidiacono
Jay Shendure
Richard K. Wilson
Evan E. Eichler

First Published June 17, 2011

Alu repeat discovery and characterization within human genomes" > Alu repeat discovery and characterization within human genomes

Fereydoun Hormozdiari
Can Alkan
Mario Ventura
Iman Hajirasouliha
Maika Malig
Faraz Hach Deniz Yorukoglu
... [+2 authors] ...,
Phuong Dao
Marzieh Bakhshi
S. Cenk Sahinalp
Evan E. Eichler

First Published December 3, 2010

Genome-wide characterization of centromeric satellites from multiple mammalian genomes

Can Alkan
Maria Francesca Cardone
Claudia Rita Catacchio
Francesca Antonacci
Stephen J. O'Brien
Oliver A. Ryder Stefania Purgato
... [+2 authors] ...,
Monica Zoli
Giuliano Della Valle
Evan E. Eichler
Mario Ventura

First Published November 16, 2010

Analysis of copy number variations among diverse cattle breeds

George E. Liu
Yali Hou
Bin Zhu
Maria Francesca Cardone
Lu Jiang
Angelo Cellamare Apratim Mitra Leeson J. Alexander Luiz L. Coutinho Maria Elena Dell'Aquila Lou C. Gasbarre Gianni Lacalandra Robert W. Li Lakshmi K. Matukumalli Dan Nonneman Luciana C. de A. Regitano Tim P.L. Smith Jiuzhou Song Tad S. Sonstegard Curt P. Van Tassell
... [+15 authors] ...,
Mario Ventura
Evan E. Eichler
Tara G. McDaneld
John W. Keele

First Published March 8, 2010

The genomic architecture of segmental duplications and associated copy number variants in dogs

Thomas J. Nicholas
Ze Cheng
Mario Ventura
Katrina Mealey
Evan E. Eichler
Joshua M. Akey

First Published January 7, 2009

Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

Santhosh Girirajan
Lin Chen
Tina Graves
Tomas Marques-Bonet
Mario Ventura
Catrina Fronick Lucinda Fulton Mariano Rocchi
... [+3 authors] ...,
Robert S. Fulton
Richard K. Wilson
Elaine R. Mardis
Evan E. Eichler

First Published November 24, 2008

cis-regulatory elements" > Close sequence comparisons are sufficient to identify human cis-regulatory elements

Shyam Prabhakar
Francis Poulin
Malak Shoukry
Veena Afzal
Edward M. Rubin
Olivier Couronne
Len A. Pennacchio

First Published June 12, 2006

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

Xinwei She
Ge Liu
Mario Ventura
Shaying Zhao
Doriana Misceo
Roberta Roberto Maria Francesca Cardone
... [+2 authors] ...,
Mariano Rocchi
Eric D. Green
Nicoletta Archidiacano
Evan E. Eichler

First Published April 10, 2006

A genome-wide survey of structural variation between human and chimpanzee

Tera L. Newman
Eray Tuzun
V. Anne Morrison
Karen E. Hayden
Mario Ventura
Sean D. McGrath
Mariano Rocchi
Evan E. Eichler

First Published September 16, 2005

Punctuated duplication seeding events during the evolution of human chromosome 2p11

Julie E. Horvath
Cassandra L. Gulden
Rhea U. Vallente
Marla Y. Eichler
Mario Ventura
John D. McPherson Tina A. Graves
... [+2 authors] ...,
Richard K. Wilson
Stuart Schwartz
Mariano Rocchi
Evan E. Eichler

First Published June 17, 2005

Recurrent Sites for New Centromere Seeding

Mario Ventura
Stefania Weigl
Lucia Carbone
Maria Francesca Cardone
Doriana Misceo
Mariagrazia Teti Pietro D'Addabbo Annelise Wandall Erik Björck Pieter J. de Jong
... [+5 authors] ...,
Xinwei She
Evan E. Eichler
Nicoletta Archidiacono
Mariano Rocchi

First Published September 1, 2004

Analysis of Segmental Duplications and Genome Assembly in the Mouse

Jeffrey A. Bailey
Deanna M. Church
Mario Ventura
Mariano Rocchi
Evan E. Eichler

First Published May 3, 2004

Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)

Fadi J. Charchar
Marta Svartman
Nisrine El-Mogharbel
Mario Ventura
Patrick Kirby
Maria R. Matarazzo
... [+1 authors] ...,
Alfredo Ciccodicola
Mariano Rocchi
Maurizio D'Esposito
Jennifer A. Marshall Graves

First Published January 14, 2003

Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25

Mario Ventura
Jonathan M. Mudge
Valeria Palumbo
Sally Burn
Elisabeth Blennow
Mauro Pierluigi Roberto Giorda
... [+2 authors] ...,
Orsetta Zuffardi
Nicoletta Archidiacono
Michael S. Jackson
Mariano Rocchi

First Published January 1, 2003

KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms" > Human Paralogs of KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms

Moira Crosier
Luigi Viggiano
Jane Guy
Doriana Misceo
Robert Stones
Wenbin Wei Tom Hearn
... [+2 authors] ...,
Mario Ventura
Nicoletta Archidiacono
Mariano Rocchi
Michael S. Jackson

First Published January 1, 2002

Centromere Emergence in Evolution

Mario Ventura
Nicoletta Archidiacono
Mariano Rocchi

First Published April 1, 2001

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Your search for returned 28 results

Single-cell template strand sequencing reveals culture-induced chromosomal instability in a gibbon cell line

A high-resolution map of small-scale inversions in the gibbon genome

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

Inversion variants in human and primate genomes

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis

Hominoid fission of chromosome 14/15 and the role of segmental duplications

Evolution and diversity of copy number variation in the great ape lineage

LRRC37 gene family" > Evolutionary dynamism of the primate LRRC37 gene family

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2

Copy number variation of individual cattle genomes using next-generation sequencing

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

Alu repeat discovery and characterization within human genomes" > Alu repeat discovery and characterization within human genomes

Genome-wide characterization of centromeric satellites from multiple mammalian genomes

Analysis of copy number variations among diverse cattle breeds

The genomic architecture of segmental duplications and associated copy number variants in dogs

Sequencing human–gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

cis-regulatory elements" > Close sequence comparisons are sufficient to identify human cis-regulatory elements

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

A genome-wide survey of structural variation between human and chimpanzee

Punctuated duplication seeding events during the evolution of human chromosome 2p11

Recurrent Sites for New Centromere Seeding

Analysis of Segmental Duplications and Genome Assembly in the Mouse

Complex Events in the Evolution of the Human Pseudoautosomal Region 2 (PAR2)

Neocentromeres in 15q24-26 Map to Duplicons Which Flanked an Ancestral Centromere in 15q25

KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms" > Human Paralogs of KIAA0187 Were Created through Independent Pericentromeric-Directed and Chromosome-Specific Duplication Mechanisms

Centromere Emergence in Evolution

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Your search for returned 28 results