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Methods

PennCNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data

  • Kai Wang
  • Mingyao Li
  • Dexter Hadley
  • Rui Liu
  • Joseph Glessner
  • Struan F.A. Grant
  • Hakon Hakonarson
  • Maja Bucan
  • First Published October 5, 2007
ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • Elliott H. Margulies
  • Gregory M. Cooper
  • George Asimenos
  • Daryl J. Thomas
  • Colin N. Dewey
  • Adam Siepel Ewan Birney Damian Keefe Ariel S. Schwartz Minmei Hou James Taylor Sergey Nikolaev Juan I. Montoya-Burgos Ari Löytynoja Simon Whelan Fabio Pardi Tim Massingham James B. Brown Peter Bickel Ian Holmes James C. Mullikin Abel Ureta-Vidal Benedict Paten Eric A. Stone Kate R. Rosenbloom W. James Kent Gerard G. Bouffard Xiaobin Guan Nancy F. Hansen Jacquelyn R. Idol Valerie V.B. Maduro Baishali Maskeri Jennifer C. McDowell Morgan Park Pamela J. Thomas Alice C. Young Robert W. Blakesley Donna M. Muzny Erica Sodergren David A. Wheeler Kim C. Worley Huaiyang Jiang George M. Weinstock Richard A. Gibbs Tina Graves Robert Fulton Elaine R. Mardis Richard K. Wilson Michele Clamp James Cuff Sante Gnerre David B. Jaffe Jean L. Chang Kerstin Lindblad-Toh Eric S. Lander Angie Hinrichs Heather Trumbower Hiram Clawson Ann Zweig Robert M. Kuhn Galt Barber Rachel Harte Donna Karolchik Matthew A. Field Richard A. Moore Carrie A. Matthewson Jacqueline E. Schein Marco A. Marra Stylianos E. Antonarakis Serafim Batzoglou Nick Goldman Ross Hardison David Haussler
  • ... [+68 authors] ...,
  • Webb Miller
  • Lior Pachter
  • Eric D. Green
  • Arend Sidow
  • First Published June 13, 2007
LETTER

Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations

  • Lawriston Wilson
  • Yung-Hao Ching
  • Michael Farias
  • Suzanne A. Hartford
  • Gareth Howell
  • Hongguang Shao
  • Maja Bucan
  • John C. Schimenti
  • First Published July 15, 2005
LETTER

Pericentromeric Duplications in the Laboratory Mouse

  • James W. Thomas
  • Mary G. Schueler
  • Tyrone J. Summers
  • Robert W. Blakesley
  • Jennifer C. McDowell
  • Pamela J. Thomas Jacquelyn R. Idol Valerie V.B. Maduro Shih-Queen Lee-Lin Jeffrey W. Touchman
  • ... [+5 authors] ...,
  • Gerard G. Bouffard
  • Stephen M. Beckstrom-Sternberg
  • NISC Comparative Sequencing Program
  • Eric D. Green
  • First Published December 30, 2002
METHODS

Parallel Construction of Orthologous Sequence-Ready Clone Contig Maps in Multiple Species

  • James W. Thomas
  • Arjun B. Prasad
  • Tyrone J. Summers
  • Shih-Queen Lee-Lin
  • Valerie V.B. Maduro
  • Jacquelyn R. Idol
  • ... [+1 authors] ...,
  • Joseph F. Ryan
  • Pamela J. Thomas
  • Jennifer C. McDowell
  • Eric D. Green
  • First Published August 1, 2002
METHODS

High-Resolution BAC-Based Map of the Central Portion of Mouse Chromosome 5

  • Jonathan Crabtree
  • Tim Wiltshire
  • Brian Brunk
  • Shaying Zhao
  • Jonathan Schug
  • Christian J. Stoeckert
  • Maja Bucan
  • First Published October 1, 2001
METHODS

Interdigitated Deletion Complexes on Mouse Chromosome 5 Induced by Irradiation of Embryonic Stem Cells

  • John C. Schimenti
  • Brian J. Libby
  • Rebecca A. Bergstrom
  • Lawriston A. Wilson
  • Dieter Naf
  • Lisa M. Tarantino
  • Alireza Alavizadeh
  • Andreas Lengeling
  • Maja Bucan
  • First Published July 1, 2000
REVIEW

Functional Genomics in the Mouse: Phenotype-Based Mutagenesis Screens

  • John Schimenti
  • Maja Bucan
  • First Published July 1, 1998
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