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Research

Coding exons function as tissue-specific enhancers of nearby genes

  • Ramon Y. Birnbaum
  • E. Josephine Clowney
  • Orly Agamy
  • Mee J. Kim
  • Jingjing Zhao
  • Takayuki Yamanaka Zachary Pappalardo Shoa L. Clarke Aaron M. Wenger Loan Nguyen Fiorella Gurrieri David B. Everman Charles E. Schwartz
  • ... [+8 authors] ...,
  • Ohad S. Birk
  • Gill Bejerano
  • Stavros Lomvardas
  • Nadav Ahituv
  • First Published March 22, 2012
Methods

Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver

  • Alayne L. Brunner
  • David S. Johnson
  • Si Wan Kim
  • Anton Valouev
  • Timothy E. Reddy
  • Norma F. Neff Elizabeth Anton Catherine Medina Loan Nguyen Eric Chiao Chuba B. Oyolu
  • ... [+6 authors] ...,
  • Gary P. Schroth
  • Devin M. Absher
  • Julie C. Baker
  • Richard M. Myers
  • First Published March 9, 2009
LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
LETTER

Serum response factor binding sites differ in three human cell types

  • Sara J. Cooper
  • Nathan D. Trinklein
  • Loan Nguyen
  • Richard M. Myers
  • First Published January 2, 2007
ARTICLE

Comprehensive analysis of transcriptional promoter structure and function in 1% of the human genome

  • Sara J. Cooper
  • Nathan D. Trinklein
  • Elizabeth D. Anton
  • Loan Nguyen
  • Richard M. Myers
  • First Published December 12, 2005
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