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Variation in the fitness impact of translationally optimal codons among animals

Florian Bénitière
Tristan Lefébure
Laurent Duret

First Published February 10, 2025

Less effective selection leads to larger genomes

Tristan Lefébure
Claire Morvan
Florian Malard
Clémentine François
Lara Konecny-Dupré
Laurent Guéguen Michèle Weiss-Gayet Andaine Seguin-Orlando Luca Ermini Clio Der Sarkissian N. Pierre Charrier David Eme Florian Mermillod-Blondin
... [+8 authors] ...,
Laurent Duret
Cristina Vieira
Ludovic Orlando
Christophe Jean Douady

First Published April 19, 2017

In vivo binding of PRDM9 reveals interactions with noncanonical genomic sites

Corinne Grey
Julie A.J. Clément
Jérôme Buard
Benjamin Leblanc
Ivo Gut
Marta Gut
Laurent Duret
Bernard de Massy

First Published March 23, 2017

Quantification of GC-biased gene conversion in the human genome

Sylvain Glémin
Peter F. Arndt
Philipp W. Messer
Dmitri Petrov
Nicolas Galtier
Laurent Duret

First Published May 20, 2015

The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes

Stephen B. Montgomery
David L. Goode
Erika Kvikstad
Cornelis A. Albers
Zhengdong D. Zhang
Xinmeng Jasmine Mu Guruprasad Ananda Bryan Howie Konrad J. Karczewski Kevin S. Smith Vanessa Anaya Rhea Richardson Joe Davis Daniel G. MacArthur Arend Sidow Laurent Duret Mark Gerstein
... [+12 authors] ...,
Kateryna D. Makova
Jonathan Marchini
Gil McVean
Gerton Lunter

First Published March 11, 2013

Genome-scale coestimation of species and gene trees

Bastien Boussau
Gergely J. Szöllősi
Laurent Duret
Manolo Gouy
Eric Tannier
Vincent Daubin

First Published November 6, 2012

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

Weisheng Wu
Yong Cheng
Cheryl A. Keller
Jason Ernst
Swathi Ashok Kumar
Tejaswini Mishra Christapher Morrissey Christine M. Dorman Kuan-Bei Chen Daniela Drautz Belinda Giardine Yoichiro Shibata Lingyun Song Max Pimkin Gregory E. Crawford Terrence S. Furey Manolis Kellis Webb Miller James Taylor Stephan C. Schuster Yu Zhang
... [+16 authors] ...,
Francesca Chiaromonte
Gerd A. Blobel
Mitchell J. Weiss
Ross C. Hardison

First Published July 27, 2011

Genome-wide identification of conserved regulatory function in diverged sequences

Leila Taher
David M. McGaughey
Samantha Maragh
Ivy Aneas
Seneca L. Bessling
Webb Miller
Marcelo A. Nobrega
Andrew S. McCallion
Ivan Ovcharenko

First Published May 31, 2011

Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression

Yong Cheng
Weisheng Wu
Swathi Ashok Kumar
Duonan Yu
Wulan Deng
Tamara Tripic David C. King Kuan-Bei Chen Ying Zhang Daniela Drautz Belinda Giardine Stephan C. Schuster Webb Miller Francesca Chiaromonte
... [+9 authors] ...,
Yu Zhang
Gerd A. Blobel
Mitchell J. Weiss
Ross C. Hardison

First Published November 3, 2009

Thylacinus cynocephalus)" > The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)

Webb Miller
Daniela I. Drautz
Jan E. Janecka
Arthur M. Lesk
Aakrosh Ratan
Lynn P. Tomsho Mike Packard Yeting Zhang Lindsay R. McClellan Ji Qi Fangqing Zhao M. Thomas P. Gilbert Love Dalén Juan Luis Arsuaga Per G.P. Ericson Daniel H. Huson
... [+11 authors] ...,
Kristofer M. Helgen
William J. Murphy
Anders Götherström
Stephan C. Schuster

First Published January 12, 2009

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