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Research

Epigenetic characterization of pseudogenes across human tissues

  • First Published April 15, 2026
Resource

Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships" > Binding profiles for 961 Drosophila and C. elegans transcription factors reveal tissue-specific regulatory relationships

  • First Published October 22, 2024
Method

Accurate reconstruction of bacterial pan- and core genomes with PEPPAN

  • First Published October 14, 2020
Resource

Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity" > The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity

  • First Published December 6, 2019
Research

Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment" > Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment

  • First Published March 21, 2019
Method

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens

  • First Published July 26, 2018
Research

Mus caroli and Mus pahari genomes" > Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

  • First Published March 21, 2018
Corrigendum

Corrigendum: Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland

  • First Published September 1, 2017
Research

Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion" > Comprehensive global genome dynamics of Chlamydia trachomatis show ancient diversification followed by contemporary mixing and recent lineage expansion

  • First Published June 6, 2017
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