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Wolffia australiana" > Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana

Tom Denyer
Pin-Jou Wu
Kelly Colt
Bradley W. Abramson
Zhili Pang
Pavel Solansky Allen Mamerto Tatsuya Nobori
... [+3 authors] ...,
Joseph R. Ecker
Eric Lam
Todd P. Michael
Marja C.P. Timmermans

First Published July 1, 2024

Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs

Michiel de Hoon
Alessandro Bonetti
Charles Plessy
Yoshinari Ando
Chung-Chau Hon
Yuri Ishizu Masayoshi Itoh Sachi Kato Dongyan Lin Sho Maekawa Mitsuyoshi Murata Hiromi Nishiyori Jay W. Shin Jens Stolte Ana Maria Suzuki Michihira Tagami Hazuki Takahashi Supat Thongjuea
... [+13 authors] ...,
Alistair R.R. Forrest
Yoshihide Hayashizaki
Juha Kere
Piero Carninci

First Published August 12, 2022

Wolffia australiana link morphological minimization with gene loss and less growth control" > Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control

Todd P. Michael
Evan Ernst
Nolan Hartwick
Philomena Chu
Douglas Bryant
Sarah Gilbert Stefan Ortleb Erin L. Baggs K. Sowjanya Sree Klaus J. Appenroth Joerg Fuchs Florian Jupe Justin P. Sandoval Ksenia V. Krasileva Ljudmylla Borisjuk
... [+10 authors] ...,
Todd C. Mockler
Joseph R. Ecker
Robert A. Martienssen
Eric Lam

First Published December 23, 2020

Comparative transcriptomics of primary cells in vertebrates

Tanvir Alam
Saumya Agrawal
Jessica Severin
Robert S. Young
Robin Andersson
Erik Arner Akira Hasegawa Marina Lizio Jordan A. Ramilowski Imad Abugessaisa Yuri Ishizu Shohei Noma Hiroshi Tarui Martin S. Taylor Timo Lassmann Masayoshi Itoh Takeya Kasukawa Hideya Kawaji Luigi Marchionni Guojun Sheng Alistair R.R. Forrest
... [+16 authors] ...,
Levon M. Khachigian
Yoshihide Hayashizaki
Piero Carninci
Michiel J.L. de Hoon

First Published July 27, 2020

The frequent evolutionary birth and death of functional promoters in mouse and human

Robert S. Young
Yoshihide Hayashizaki
Robin Andersson
Albin Sandelin
Hideya Kawaji
Masayoshi Itoh Timo Lassmann
... [+2 authors] ...,
Piero Carninci
Wendy A. Bickmore
Alistair R. Forrest
Martin S. Taylor

First Published July 30, 2015

Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways

Weishi Yu
Carl McIntosh
Ryan Lister
Iris Zhu
Yixing Han
Jianke Ren David Landsman Eunice Lee Victorino Briones
... [+4 authors] ...,
Minoru Terashima
Robert Leighty
Joseph R. Ecker
Kathrin Muegge

First Published August 28, 2014

Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing

Hideya Kawaji
Marina Lizio
Masayoshi Itoh
Mutsumi Kanamori-Katayama
Ai Kaiho
Hiromi Nishiyori-Sueki Jay W. Shin Miki Kojima-Ishiyama Mitsuoki Kawano Mitsuyoshi Murata Noriko Ninomiya-Fukuda Sachi Ishikawa-Kato Sayaka Nagao-Sato
... [+8 authors] ...,
Shohei Noma
Yoshihide Hayashizaki
Alistair R.R. Forrest
Piero Carninci

First Published March 27, 2014

cis-mediated silencing in somatic cells" > Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells

Timothy J. Looney
Li Zhang
Chih-Hsin Chen
Jae Hyun Lee
Sheila Chari
Frank Fuxiang Mao Mattia Pelizzola Lu Zhang Ryan Lister Samuel W. Baker Croydon J. Fernandes Jedidiah Gaetz Kara M. Foshay Kayla L. Clift Zhenyu Zhang Wei-Qiang Li Eric J. Vallender Ulrich Wagner Jane Yuxia Qin Katelyn J. Michelini Branimir Bugarija Donghyun Park Emmanuel Aryee Thomas Stricker Jie Zhou Kevin P. White Bing Ren
... [+22 authors] ...,
Gary P. Schroth
Joseph R. Ecker
Andy Peng Xiang
Bruce T. Lahn

First Published December 5, 2013

Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population

Robert J. Schmitz
Yupeng He
Oswaldo Valdés-López
Saad M. Khan
Trupti Joshi
Mark A. Urich Joseph R. Nery
... [+2 authors] ...,
Brian Diers
Dong Xu
Gary Stacey
Joseph R. Ecker

First Published June 5, 2013

Promoter architecture of mouse olfactory receptor genes

Charles Plessy
Giovanni Pascarella
Nicolas Bertin
Altuna Akalin
Claudia Carrieri
Anne Vassalli Dejan Lazarevic Jessica Severin Christina Vlachouli Roberto Simone Geoffrey J. Faulkner Jun Kawai Carsten O. Daub Silvia Zucchelli Yoshihide Hayashizaki
... [+10 authors] ...,
Peter Mombaerts
Boris Lenhard
Stefano Gustincich
Piero Carninci

First Published December 22, 2011

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