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Resource

Wolffia australiana" > Streamlined spatial and environmental expression signatures characterize the minimalist duckweed Wolffia australiana

  • Tom Denyer
  • Pin-Jou Wu
  • Kelly Colt
  • Bradley W. Abramson
  • Zhili Pang
  • Pavel Solansky Allen Mamerto Tatsuya Nobori
  • ... [+3 authors] ...,
  • Joseph R. Ecker
  • Eric Lam
  • Todd P. Michael
  • Marja C.P. Timmermans
  • First Published July 1, 2024
Research

Wolffia australiana link morphological minimization with gene loss and less growth control" > Genome and time-of-day transcriptome of Wolffia australiana link morphological minimization with gene loss and less growth control

  • Todd P. Michael
  • Evan Ernst
  • Nolan Hartwick
  • Philomena Chu
  • Douglas Bryant
  • Sarah Gilbert Stefan Ortleb Erin L. Baggs K. Sowjanya Sree Klaus J. Appenroth Joerg Fuchs Florian Jupe Justin P. Sandoval Ksenia V. Krasileva Ljudmylla Borisjuk
  • ... [+10 authors] ...,
  • Todd C. Mockler
  • Joseph R. Ecker
  • Robert A. Martienssen
  • Eric Lam
  • First Published December 23, 2020
Research

Callithrix jacchus genome" > Discovery of a new repeat family in the Callithrix jacchus genome

  • Miriam K. Konkel
  • Brygg Ullmer
  • Erika L. Arceneaux
  • Sreeja Sanampudi
  • Sarah A. Brantley
  • Robert Hubley
  • Arian F.A. Smit
  • Mark A. Batzer
  • First Published February 25, 2016
Research

Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways

  • Weishi Yu
  • Carl McIntosh
  • Ryan Lister
  • Iris Zhu
  • Yixing Han
  • Jianke Ren David Landsman Eunice Lee Victorino Briones
  • ... [+4 authors] ...,
  • Minoru Terashima
  • Robert Leighty
  • Joseph R. Ecker
  • Kathrin Muegge
  • First Published August 28, 2014
Research

cis-mediated silencing in somatic cells" > Systematic mapping of occluded genes by cell fusion reveals prevalence and stability of cis-mediated silencing in somatic cells

  • Timothy J. Looney
  • Li Zhang
  • Chih-Hsin Chen
  • Jae Hyun Lee
  • Sheila Chari
  • Frank Fuxiang Mao Mattia Pelizzola Lu Zhang Ryan Lister Samuel W. Baker Croydon J. Fernandes Jedidiah Gaetz Kara M. Foshay Kayla L. Clift Zhenyu Zhang Wei-Qiang Li Eric J. Vallender Ulrich Wagner Jane Yuxia Qin Katelyn J. Michelini Branimir Bugarija Donghyun Park Emmanuel Aryee Thomas Stricker Jie Zhou Kevin P. White Bing Ren
  • ... [+22 authors] ...,
  • Gary P. Schroth
  • Joseph R. Ecker
  • Andy Peng Xiang
  • Bruce T. Lahn
  • First Published December 5, 2013
Research

Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population

  • Robert J. Schmitz
  • Yupeng He
  • Oswaldo Valdés-López
  • Saad M. Khan
  • Trupti Joshi
  • Mark A. Urich Joseph R. Nery
  • ... [+2 authors] ...,
  • Brian Diers
  • Dong Xu
  • Gary Stacey
  • Joseph R. Ecker
  • First Published June 5, 2013
Method

Alu insertions in diverse human populations" > Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

  • David J. Witherspoon
  • Yuhua Zhang
  • Jinchuan Xing
  • W. Scott Watkins
  • Hongseok Ha
  • Mark A. Batzer
  • Lynn B. Jorde
  • First Published April 18, 2013
Research

Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

  • Gary C. Hon
  • R. David Hawkins
  • Otavia L. Caballero
  • Christine Lo
  • Ryan Lister
  • Mattia Pelizzola Armand Valsesia Zhen Ye Samantha Kuan Lee E. Edsall Anamaria Aranha Camargo Brian J. Stevenson Joseph R. Ecker
  • ... [+8 authors] ...,
  • Vineet Bafna
  • Robert L. Strausberg
  • Andrew J. Simpson
  • Bing Ren
  • First Published December 7, 2011
Perspective

Reading TE leaves: New approaches to the identification of transposable element insertions

  • David A. Ray
  • Mark A. Batzer
  • First Published June 1, 2011
Letter

5′-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

  • Annette Damert
  • Julija Raiz
  • Axel V. Horn
  • Johannes Löwer
  • Hui Wang
  • Jinchuan Xing
  • Mark A. Batzer
  • Roswitha Löwer
  • Gerald G. Schumann
  • First Published August 3, 2009
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