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Method

Analyzing rare mutations in metagenomes assembled using long and accurate reads

  • First Published November 23, 2022
Method

Fast and accurate mapping of long reads to complete genome assemblies with VerityMap

  • First Published November 15, 2022
Method

Automated annotation of human centromeres with HORmon

  • First Published May 11, 2022
Method

Variations in antibody repertoires correlate with vaccine responses

  • First Published March 31, 2022
Method

Plasmid detection and assembly in genomic and metagenomic data sets

  • First Published May 2, 2019
Research

Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line

  • First Published June 28, 2018
Method

Detection and analysis of ancient segmental duplications in mammalian genomes

  • First Published May 7, 2018
Method

metaSPAdes: a new versatile metagenomic assembler

  • First Published March 15, 2017
Method

Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform" > Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform

  • First Published April 5, 2013
Resource

Breakpoint graphs and ancestral genome reconstructions

  • First Published February 13, 2009
Methods

Comparative proteogenomics: Combining mass spectrometry and comparative genomics to analyze multiple genomes

  • First Published April 21, 2008
Methods

Short read fragment assembly of bacterial genomes

  • First Published December 14, 2007
LETTER

Massively parallel bisulphite pyrosequencing reveals the molecular complexity of breast cancer-associated cytosine-methylation patterns obtained from tissue and serum DNA

  • First Published November 21, 2007
Methods

Whole proteome analysis of post-translational modifications: Applications of mass-spectrometry for proteogenomic annotation

  • First Published August 9, 2007
Forum

The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction

  • First Published March 1, 2006
LETTER

Punctuated duplication seeding events during the evolution of human chromosome 2p11

  • First Published June 17, 2005
Chicken Special/Letters

Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages

  • First Published December 8, 2004
Methods

Histoplasma capsulatum Genome" > Fosmid-Based Physical Mapping of the Histoplasma capsulatum Genome

  • First Published August 2, 2004
RESOURCE

Integrated and Sequence-Ordered BAC- and YAC-Based Physical Maps for the Rat Genome

  • First Published April 1, 2004
ARTICLE

Reconstructing the Genomic Architecture of Ancestral Mammals: Lessons From Human, Mouse, and Rat Genomes

  • First Published April 1, 2004
METHODS

Software for Automated Analysis of DNA Fingerprinting Gels

  • First Published May 1, 2003
LETTER

Genome-Scale Evolution: Reconstructing Gene Orders in the Ancestral Species

  • First Published January 1, 2002
INSIGHT/OUTLOOK

Assembling Puzzles from Preassembled Blocks

  • First Published September 1, 2001
METHODS

Efficiency of Database Search for Identification of Mutated and Modified Proteins via Mass Spectrometry

  • First Published February 1, 2001
LETTER

The Syntenic Relationship of the Zebrafish and Human Genomes

  • First Published September 1, 2000
LETTER

CMT2D Locus: Refined Genetic Position and Construction of a Bacterial Clone-Based Physical Map" > The CMT2D Locus: Refined Genetic Position and Construction of a Bacterial Clone-Based Physical Map

  • First Published June 1, 1999
INSIGHT/OUTLOOK

Sequence Ready—or Not?

  • First Published December 1, 1997
LETTER

High Throughput Fingerprint Analysis of Large-Insert Clones

  • First Published November 1, 1997
RESEARCH

A Radiation Hybrid Map of Human Chromosome 5 with Integration of Cytogenetic, Genetic, and Transcript Maps

  • First Published September 1, 1997
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