Research
Closing the gaps, and improving somatic structural variant analysis and benchmarking using CHM13-T2T
- First Published March 17, 2025
Method
Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm
- First Published March 4, 2025
Research
Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation
- First Published December 5, 2024
Method
k-mer analysis" > Seamless, rapid, and accurate analyses of outbreak genomic data using split k-mer analysis
- First Published October 15, 2024
Method
Pangenome-spanning epistasis and coselection analysis via de Bruijn graphs
- First Published August 12, 2024
Method
Accurate and fast graph-based pangenome annotation and clustering with ggCaller
- First Published August 24, 2023
Method
Genealogical inference and more flexible sequence clustering using iterative-PopPUNK
- First Published May 30, 2023
Method
Fast and flexible bacterial genomic epidemiology with PopPUNK
- First Published January 24, 2019
Method
Defining cell-type specificity at the transcriptional level in human disease
- First Published August 15, 2013
Research
Locus co-occupancy, nucleosome positioning, and H3K4me1 regulate the functionality of FOXA2-, HNF4A-, and PDX1-bound loci in islets and liver
- First Published June 15, 2010