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Your search for returned 32 results

Research

Closing the gaps, and improving somatic structural variant analysis and benchmarking using CHM13-T2T

Luis F. Paulin
Jeremy Fan
Kieran O'Neill
Erin Pleasance
Vanessa L. Porter
Steven J.M. Jones
Fritz J. Sedlazeck

First Published March 17, 2025

Research

Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation

Vanessa L. Porter
Michelle Ng
Kieran O'Neill
Signe MacLennan
Richard D. Corbett
Luka Culibrk Zeid Hamadeh Marissa Iden Rachel Schmidt Shirng-Wern Tsaih Carolyn Nakisige Martin Origa Jackson Orem Glenn Chang Jeremy Fan Ka Ming Nip Vahid Akbari Simon K. Chan James Hopkins Richard A. Moore Eric Chuah Karen L. Mungall Andrew J. Mungall
... [+18 authors] ...,
Inanc Birol
Steven J.M. Jones
Janet S. Rader
Marco A. Marra

First Published December 5, 2024

Research

Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the environment

Theodore Gouliouris
Kathy E. Raven
Danesh Moradigaravand
Catherine Ludden
Francesc Coll
Beth Blane Plamena Naydenova Carolyne Horner Nicholas M. Brown
... [+4 authors] ...,
Jukka Corander
Direk Limmathurotsakul
Julian Parkhill
Sharon J. Peacock

First Published March 21, 2019

Corrigendum

Corrigendum: Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland

Sandra Reuter
M. Estée Török
Matthew T.G. Holden
Rosy Reynolds
Kathy E. Raven
Beth Blane Tjibbe Donker Stephen D. Bentley David M. Aanensen Hajo Grundmann
... [+5 authors] ...,
Edward J. Feil
Brian G. Spratt
Julian Parkhill
Sharon J. Peacock

First Published September 1, 2017

Research

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

Teemu Kallonen
Hayley J. Brodrick
Simon R. Harris
Jukka Corander
Nicholas M. Brown
Veronique Martin
Sharon J. Peacock
Julian Parkhill

First Published July 18, 2017

Research

A decade of genomic history for healthcare-associated Enterococcus faecium in the United Kingdom and Ireland

Kathy E. Raven
Sandra Reuter
Rosy Reynolds
Hayley J. Brodrick
Julie E. Russell
M. Estée Török
Julian Parkhill
Sharon J. Peacock

First Published August 15, 2016

Research

Recent independent emergence of multiple multidrug-resistant Serratia marcescens clones within the United Kingdom and Ireland

Danesh Moradigaravand
Christine J. Boinett
Veronique Martin
Sharon J. Peacock
Julian Parkhill

First Published July 18, 2016

Resource

Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland

Sandra Reuter
M. Estée Török
Matthew T.G. Holden
Rosy Reynolds
Kathy E. Raven
Beth Blane Tjibbe Donker Stephen D. Bentley David M. Aanensen Hajo Grundmann
... [+5 authors] ...,
Edward J. Feil
Brian G. Spratt
Julian Parkhill
Sharon J. Peacock

First Published December 15, 2015

Research

DIS3 shapes the RNA polymerase II transcriptome in humans by degrading a variety of unwanted transcripts

Teresa Szczepińska
Katarzyna Kalisiak
Rafal Tomecki
Anna Labno
Lukasz S. Borowski
Tomasz M. Kulinski
Dorota Adamska
Joanna Kosinska
Andrzej Dziembowski

First Published August 20, 2015

Research

Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting

Steven Y.C. Tong
Matthew T.G. Holden
Emma K. Nickerson
Ben S. Cooper
Claudio U. Köser
Anne Cori Thibaut Jombart Simon Cauchemez Christophe Fraser Vanaporn Wuthiekanun Janjira Thaipadungpanit Maliwan Hongsuwan
... [+7 authors] ...,
Nicholas P. Day
Direk Limmathurotsakul
Julian Parkhill
Sharon J. Peacock

First Published December 9, 2014

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