Method
Unified integration of spatial transcriptomics across platforms with LLOKI
- First Published November 13, 2025
Editorial
Innovations in computational biology: RECOMB 2024 Special Issue
- First Published October 11, 2024
Resource
Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes
- First Published July 1, 2024
Method
Domain-adaptive neural networks improve cross-species prediction of transcription factor binding
- First Published January 18, 2022
Method
TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes
- First Published December 18, 2020
Resource
An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis
- First Published March 4, 2020
Method
MOCHI enables discovery of heterogeneous interactome modules in 3D nucleome
- First Published January 6, 2020
Research
Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks
- First Published February 13, 2019
Method
HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient
- First Published August 30, 2017
Resource
Annotation and cluster analysis of spatiotemporal- and sex-related lncRNA expression in rhesus macaque brain
- First Published July 7, 2017