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Method

Multicondition and multimodal temporal profile inference during mouse embryonic development

  • Ran Zhang
  • Chengxiang Qiu
  • Galina N. Filippova
  • Gang Li
  • Jay Shendure
  • Jean-Philippe Vert
  • Xinxian Deng
  • William Stafford Noble
  • Christine M. Disteche
  • First Published August 14, 2025
Resource

High-quality sika deer omics data and integrative analysis reveal genic and cellular regulation of antler regeneration

  • Zihe Li
  • Ziyu Xu
  • Lei Zhu
  • Tao Qin
  • Jinrui Ma
  • Zhanying Feng Huishan Yue Qing Guan Botong Zhou Ge Han Guokun Zhang Chunyi Li Shuaijun Jia
  • ... [+8 authors] ...,
  • Qiang Qiu
  • Dingjun Hao
  • Yong Wang
  • Wen Wang
  • First Published November 14, 2024
Method

Antibody-free profiling of transcription factor occupancy during early embryogenesis by FitCUT&RUN

  • Xiangxiu Wang
  • Wen Wang
  • Yiman Wang
  • Jia Chen
  • Guifen Liu
  • Yong Zhang
  • First Published December 29, 2021
Research

Ligand-induced native G-quadruplex stabilization impairs transcription initiation

  • Conghui Li
  • Honghong Wang
  • Zhinang Yin
  • Pingping Fang
  • Ruijing Xiao
  • Ying Xiang Wen Wang
  • ... [+2 authors] ...,
  • Qiuzi Li
  • Beili Huang
  • Jian Huang
  • Kaiwei Liang
  • First Published August 16, 2021
Resource

Caenorhabditis elegans nematodes" > Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes

  • Timothy J. Durham
  • Riza M. Daza
  • Louis Gevirtzman
  • Darren A. Cusanovich
  • Olubusayo Bolonduro
  • William Stafford Noble
  • Jay Shendure
  • Robert H. Waterston
  • First Published April 22, 2021
Research

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

  • Brian S. Roberts
  • E. Christopher Partridge
  • Bryan A. Moyers
  • Vikram Agarwal
  • Kimberly M. Newberry
  • Beth K. Martin
  • Jay Shendure
  • Richard M. Myers
  • Gregory M. Cooper
  • First Published April 20, 2021
Research

Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology" > Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology

  • Adebola Enikanolaiye
  • Julie Ruston
  • Rong Zeng
  • Christine Taylor
  • Marijke Schrock
  • Christie M. Buchovecky
  • Jay Shendure
  • Elif Acar
  • Monica J. Justice
  • First Published April 21, 2020
Corrigendum

Corrigendum: Inherited DNA methylation primes the establishment of accessible chromatin during genome activation

  • Guifen Liu
  • Wen Wang
  • Shengen Hu
  • Xiangxiu Wang
  • Yong Zhang
  • First Published March 1, 2019
Research

Inherited DNA methylation primes the establishment of accessible chromatin during genome activation

  • Guifen Liu
  • Wen Wang
  • Shengen Hu
  • Xiangxiu Wang
  • Yong Zhang
  • First Published May 29, 2018
Research

A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity

  • Fumitaka Inoue
  • Martin Kircher
  • Beth Martin
  • Gregory M. Cooper
  • Daniela M. Witten
  • Michael T. McManus
  • Nadav Ahituv
  • Jay Shendure
  • First Published November 9, 2016
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