Search | Genome Research

Your search for returned 44 results

Method

Multisource omic alignment and biological feature discovery with Performer encoder and triplet networks

Zihuan Du
Xiaoyu Zhang
Qiang Zhang
Jing Li
Zhijie Cao
Ge Gao
Tao Lin
Dong Wang
Shuai Gao

First Published July 22, 2026

Research

LTR7-PLAAT4 as a potential oncogene and therapeutic target in pancreatic adenocarcinoma" > Transcriptomic landscape of transposable elements reveals LTR7-PLAAT4 as a potential oncogene and therapeutic target in pancreatic adenocarcinoma

Meilong Shi
Chuanqi Teng
Shan Zhang
Xiaobo He
Lingyun Xu
Fengxian Han Rongqi Wen Ganjun Yu Jingwen Liu Yang Feng
... [+5 authors] ...,
Yanfeng Wu
Yan Ren
Gang Jin
Jing Li

First Published January 8, 2026

Method

Multicondition and multimodal temporal profile inference during mouse embryonic development

Ran Zhang
Chengxiang Qiu
Galina N. Filippova
Gang Li
Jay Shendure
Jean-Philippe Vert
Xinxian Deng
William Stafford Noble
Christine M. Disteche

First Published August 14, 2025

Resource

Haplotype-resolved 3D chromatin architecture of the hybrid pig

Yu Lin
Jing Li
Yiren Gu
Long Jin
Jingyi Bai
Jiaman Zhang Yujie Wang Pengliang Liu Keren Long Mengnan He Diyan Li Can Liu Ziyin Han Yu Zhang Xiaokai Li Bo Zeng Lu Lu Fanli Kong Ying Sun Yongliang Fan Xun Wang Tao Wang An'an Jiang Jideng Ma Linyuan Shen Li Zhu Yanzhi Jiang Guoqing Tang Xiaolan Fan Qingyou Liu Hua Li Jinyong Wang Li Chen
... [+28 authors] ...,
Liangpeng Ge
Xuewei Li
Qianzi Tang
Mingzhou Li

First Published March 13, 2024

Resource

Caenorhabditis elegans nematodes" > Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes

Timothy J. Durham
Riza M. Daza
Louis Gevirtzman
Darren A. Cusanovich
Olubusayo Bolonduro
William Stafford Noble
Jay Shendure
Robert H. Waterston

First Published April 22, 2021

Research

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

Brian S. Roberts
E. Christopher Partridge
Bryan A. Moyers
Vikram Agarwal
Kimberly M. Newberry
Beth K. Martin
Jay Shendure
Richard M. Myers
Gregory M. Cooper

First Published April 20, 2021

Resource

A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes

Jing Liu
Zongji Wang
Jing Li
Luohao Xu
Jiaqi Liu
Shaohong Feng Chunxue Guo Shengchan Chen Zhanjun Ren Jinpeng Rao Kai Wei
... [+6 authors] ...,
Yuezhou Chen
Erich D. Jarvis
Guojie Zhang
Qi Zhou

First Published January 6, 2021

Research

Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology" > Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology

Adebola Enikanolaiye
Julie Ruston
Rong Zeng
Christine Taylor
Marijke Schrock
Christie M. Buchovecky
Jay Shendure
Elif Acar
Monica J. Justice

First Published April 21, 2020

Research

Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis

Hector L. Franco
Anusha Nagari
Venkat S. Malladi
Wenqian Li
Yuanxin Xi
Dana Richardson Kendra L. Allton Kaori Tanaka Jing Li Shino Murakami Khandan Keyomarsi Mark T. Bedford Xiaobing Shi
... [+8 authors] ...,
Wei Li
Michelle C. Barton
Sharon Y.R. Dent
W. Lee Kraus

First Published December 22, 2017

Research

Yeast genetic interaction screen of human genes associated with amyotrophic lateral sclerosis: identification of MAP2K5 kinase as a potential drug target

Myungjin Jo
Ah Young Chung
Nozomu Yachie
Minchul Seo
Hyejin Jeon
Youngpyo Nam Yeojin Seo Eunmi Kim Quan Zhong
... [+4 authors] ...,
Marc Vidal
Hae Chul Park
Frederick P. Roth
Kyoungho Suk

First Published June 8, 2017

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