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Method

Unified integration of spatial transcriptomics across platforms with LLOKI

  • First Published November 13, 2025
Method

Multicondition and multimodal temporal profile inference during mouse embryonic development

  • First Published August 14, 2025
Research

Integrating short-read and long-read single-cell RNA sequencing for comprehensive transcriptome profiling in mouse retina

  • First Published March 6, 2025
Editorial

Innovations in computational biology: RECOMB 2024 Special Issue

  • First Published October 11, 2024
Method

CodonBERT large language model for mRNA vaccines

  • First Published July 1, 2024
Resource

Caenorhabditis elegans nematodes" > Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes

  • First Published April 22, 2021
Research

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

  • First Published April 20, 2021
Method

TSA-seq reveals a largely conserved genome organization relative to nuclear speckles with small position changes tightly correlated with gene expression changes

  • First Published December 18, 2020
Method

Predicting unrecognized enhancer-mediated genome topology by an ensemble machine learning model

  • First Published November 12, 2020
Research

Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology" > Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology

  • First Published April 21, 2020
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