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Research

Closing the gaps, and improving somatic structural variant analysis and benchmarking using CHM13-T2T

  • First Published March 17, 2025
Research

Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation

  • First Published December 5, 2024
Research

Drosophila embryo" > Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the early Drosophila embryo

  • First Published September 2, 2015
Research

Variation in chromatin accessibility in human kidney cancer links H3K36 methyltransferase loss with widespread RNA processing defects

  • First Published October 24, 2013
Method

Spark: A navigational paradigm for genomic data exploration

  • First Published September 7, 2012
Resource

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

  • First Published September 5, 2012
Research

Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells

  • First Published November 16, 2011
Research

Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription

  • First Published November 15, 2011
Resource

Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity

  • First Published July 12, 2011
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