Perspective
The impact of long-read sequencing on human population-scale genomics
- First Published April 14, 2025
Research
Integrating short-read and long-read single-cell RNA sequencing for comprehensive transcriptome profiling in mouse retina
- First Published March 6, 2025
Resource
An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes
- First Published December 5, 2024
Research
Gaps and complex structurally variant loci in phased genome assemblies
- First Published May 10, 2023
Resource
A high-resolution map of small-scale inversions in the gibbon genome
- First Published September 30, 2022
Research
Somatic structural variant formation is guided by and influences genome architecture
- First Published February 17, 2022
Method
Predicting unrecognized enhancer-mediated genome topology by an ensemble machine learning model
- First Published November 12, 2020
Resource
Assembly and analysis of 100 full MHC haplotypes from the Danish population
- First Published August 3, 2017
Research
Pan-cancer analysis distinguishes transcriptional changes of aneuploidy from proliferation
- First Published March 20, 2017
Research
SCRaMbLE generates designed combinatorial stochastic diversity in synthetic chromosomes
- First Published November 13, 2015
Research
Epigenetic modification and inheritance in sexual reversal of fish
- First Published February 2, 2014
Research
Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma
- First Published June 20, 2013
Resource
Drosophila melanogaster based on population-scale sequencing" > Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing
- First Published December 6, 2012
Resource
Pyrus bretschneideri Rehd.)" > The genome of the pear (Pyrus bretschneideri Rehd.)
- First Published November 13, 2012
Resource
SOAPindel: Efficient identification of indels from short paired reads
- First Published September 12, 2012
Research
Relating CNVs to transcriptome data at fine resolution: Assessment of the effect of variant size, type, and overlap with functional regions
- First Published August 23, 2011
Research
Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome
- First Published March 19, 2010
Resource
De novo assembly of human genomes with massively parallel short read sequencing
- First Published December 17, 2009
Methods
MSB: A mean-shift-based approach for the analysis of structural variation in the genome
- First Published November 26, 2008
ARTICLE
The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci
- First Published June 13, 2007
LETTER
Structured RNAs in the ENCODE selected regions of the human genome
- First Published June 13, 2007
PERSPECTIVE
What is a gene, post-ENCODE? History and updated definition
- First Published June 13, 2007
LETTER
Arabidopsis" > A microarray analysis of the rice transcriptome and its comparison to Arabidopsis
- First Published September 1, 2005
