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Method

Dual threshold optimization and network inference reveal convergent evidence from TF binding locations and TF perturbation responses

  • First Published February 14, 2020
Method

Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation

  • First Published February 2, 2015
Method

Mapping functional transcription factor networks from gene expression data

  • First Published May 1, 2013
Resource

Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines

  • First Published December 22, 2010
Resource

ABySS: A parallel assembler for short read sequence data

  • First Published February 27, 2009
Methods

Targeted discovery of novel human exons by comparative genomics

  • First Published November 7, 2007
ARTICLE

Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome

  • First Published June 13, 2007
Methods

A tale of two templates: Automatically resolving double traces has many applications, including efficient PCR-based elucidation of alternative splices

  • First Published January 8, 2007
Methods

Physical map-assisted whole-genome shotgun sequence assemblies

  • First Published June 1, 2006
RESOURCE

Iterative gene prediction and pseudogene removal improves genome annotation

  • First Published May 1, 2006
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