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Corrigendum

Corrigendum: Enhancer–silencer transitions in the human genome

  • Di Huang
  • Ivan Ovcharenko
  • First Published June 24, 2022
Research

Enhancer–silencer transitions in the human genome

  • Di Huang
  • Ivan Ovcharenko
  • First Published February 1, 2022
Method

Identification of human silencers by correlating cross-tissue epigenetic profiles and gene expression

  • Di Huang
  • Hanna M. Petrykowska
  • Brendan F. Miller
  • Laura Elnitski
  • Ivan Ovcharenko
  • First Published March 18, 2019
Method

Systematic elucidation and in vivo validation of sequences enriched in hindbrain transcriptional control

  • Grzegorz M. Burzynski
  • Xylena Reed
  • Leila Taher
  • Zachary E. Stine
  • Takeshi Matsui
  • Ivan Ovcharenko
  • Andrew S. McCallion
  • First Published July 3, 2012
Method

Genome-wide identification of conserved regulatory function in diverged sequences

  • Leila Taher
  • David M. McGaughey
  • Samantha Maragh
  • Ivy Aneas
  • Seneca L. Bessling
  • Webb Miller
  • Marcelo A. Nobrega
  • Andrew S. McCallion
  • Ivan Ovcharenko
  • First Published May 31, 2011
Research

Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers

  • Valer Gotea
  • Axel Visel
  • John M. Westlund
  • Marcelo A. Nobrega
  • Len A. Pennacchio
  • Ivan Ovcharenko
  • First Published April 2, 2010
Methods

Genome-wide discovery of human heart enhancers

  • Leelavati Narlikar
  • Noboru J. Sakabe
  • Alexander A. Blanski
  • Fabio E. Arimura
  • John M. Westlund
  • Marcelo A. Nobrega
  • Ivan Ovcharenko
  • First Published January 14, 2010
LETTER

Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions

  • Laurie Gordon
  • Shan Yang
  • Mary Tran-Gyamfi
  • Dan Baggott
  • Mari Christensen
  • Aaron Hamilton Richard Crooijmans
  • ... [+2 authors] ...,
  • Martien Groenen
  • Susan Lucas
  • Ivan Ovcharenko
  • Lisa Stubbs
  • First Published October 5, 2007
Methods

Predicting tissue-specific enhancers in the human genome

  • Len A. Pennacchio
  • Gabriela G. Loots
  • Marcelo A. Nobrega
  • Ivan Ovcharenko
  • First Published January 8, 2007
LETTER

Identification of clustered YY1 binding sites in imprinting control regions

  • Jeong Do Kim
  • Angela K. Hinz
  • Anne Bergmann
  • Jennifer M. Huang
  • Ivan Ovcharenko
  • Lisa Stubbs
  • Joomyeong Kim
  • First Published June 7, 2006
Chicken Special/Resources

Mulan: Multiple-sequence local alignment and visualization for studying function and evolution

  • Ivan Ovcharenko
  • Gabriela G. Loots
  • Belinda M. Giardine
  • Minmei Hou
  • Jian Ma
  • Ross C. Hardison
  • Lisa Stubbs
  • Webb Miller
  • First Published December 8, 2004
Chicken Special/Letters

Evolution and functional classification of vertebrate gene deserts

  • Ivan Ovcharenko
  • Gabriela G. Loots
  • Marcelo A. Nobrega
  • Ross C. Hardison
  • Webb Miller
  • Lisa Stubbs
  • First Published December 8, 2004
RESOURCE

eShadow: A Tool for Comparing Closely Related Sequences

  • Ivan Ovcharenko
  • Dario Boffelli
  • Gabriela G. Loots
  • First Published June 1, 2004
RESOURCE

zPicture: Dynamic Alignment and Visualization Tool for Analyzing Conservation Profiles

  • Ivan Ovcharenko
  • Gabriela G. Loots
  • Ross C. Hardison
  • Webb Miller
  • Lisa Stubbs
  • First Published March 1, 2004
METHODS

rVista for Comparative Sequence-Based Discovery of Functional Transcription Factor Binding Sites" > rVista for Comparative Sequence-Based Discovery of Functional Transcription Factor Binding Sites

  • Gabriela G. Loots
  • Ivan Ovcharenko
  • Lior Pachter
  • Inna Dubchak
  • Edward M. Rubin
  • First Published April 12, 2002
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