Corrigendum
Corrigendum: Enhancer–silencer transitions in the human genome
- First Published June 24, 2022
Resource
A limited set of transcriptional programs define major cell types
- First Published July 29, 2020
Resource
Dynamics of microRNA expression during mouse prenatal development
- First Published October 23, 2019
Method
Identification of human silencers by correlating cross-tissue epigenetic profiles and gene expression
- First Published March 18, 2019
Research
De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements
- First Published June 28, 2013
Research
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
- First Published September 5, 2012
Resource
The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression
- First Published September 5, 2012
Research
Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs
- First Published September 5, 2012
Method
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
- First Published August 30, 2012
Method
Systematic elucidation and in vivo validation of sequences enriched in hindbrain transcriptional control
- First Published July 3, 2012
Method
Genome-wide identification of conserved regulatory function in diverged sequences
- First Published May 31, 2011
Resource
Drosophila cell lines" > The transcriptional diversity of 25 Drosophila cell lines
- First Published December 22, 2010
Research
Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers
- First Published April 2, 2010
LETTER
Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
- First Published February 7, 2008
LETTER
Whole-genome maps of USF1 and USF2 binding and histone H3 acetylation reveal new aspects of promoter structure and candidate genes for common human disorders
- First Published January 29, 2008
LETTER
Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions
- First Published October 5, 2007
ARTICLE
The DART classification of unannotated transcription within the ENCODE regions: Associating transcription with known and novel loci
- First Published June 13, 2007
ARTICLE
Prominent use of distal 5′ transcription start sites and discovery of a large number of additional exons in ENCODE regions
- First Published June 13, 2007
LETTER
Pseudogenes in the ENCODE regions: Consensus annotation, analysis of transcription, and evolution
- First Published June 13, 2007
LETTER
Structured RNAs in the ENCODE selected regions of the human genome
- First Published June 13, 2007
LETTER
Identification of clustered YY1 binding sites in imprinting control regions
- First Published June 7, 2006
Methods
Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays
- First Published July 5, 2005
Chicken Special/Resources
Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
- First Published December 8, 2004
Chicken Special/Letters
Evolution and functional classification of vertebrate gene deserts
- First Published December 8, 2004
RESOURCE
zPicture: Dynamic Alignment and Visualization Tool for Analyzing Conservation Profiles
- First Published March 1, 2004
ARTICLE
Novel RNAs Identified From an In-Depth Analysis of the Transcriptome of Human Chromosomes 21 and 22
- First Published March 1, 2004
METHODS
Flexible Use of High-Density Oligonucleotide Arrays for Single-Nucleotide Polymorphism Discovery and Validation
- First Published July 12, 2001
LETTER
Mycobacterium tuberculosis " > Comparing Genomes within the Species Mycobacterium tuberculosis
- First Published April 1, 2001
METHODS
Detection of Deleted Genomic DNA Using a Semiautomated Computational Analysis of GeneChip Data
- First Published November 21, 2000
