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Letter

Functional diversity for REST (NRSF) is defined by in vivo binding affinity hierarchies at the DNA sequence level

  • Alexander W. Bruce
  • Andrés J. López-Contreras
  • Paul Flicek
  • Thomas A. Down
  • Pawandeep Dhami
  • Shane C. Dillon Christoph M. Koch
  • ... [+2 authors] ...,
  • Cordelia F. Langford
  • Ian Dunham
  • Robert M. Andrews
  • David Vetrie
  • First Published April 28, 2009
LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
RESOURCE

Islands of euchromatin-like sequence and expressed polymorphic sequences within the short arm of human chromosome 21

  • Robert Lyle
  • Paola Prandini
  • Kazutoyo Osoegawa
  • Boudewijn ten Hallers
  • Sean Humphray
  • Baoli Zhu Eduardo Eyras Robert Castelo Christine P. Bird Sarantos Gagos Carol Scott Antony Cox Samuel Deutsch Catherine Ucla Marc Cruts Sophie Dahoun Xinwei She Frederique Bena Sheng-Yue Wang Christine Van Broeckhoven Evan E. Eichler Roderic Guigo
  • ... [+17 authors] ...,
  • Jane Rogers
  • Pieter J. de Jong
  • Alexandre Reymond
  • Stylianos E. Antonarakis
  • First Published September 25, 2007
ARTICLE

Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genes

  • Alvaro Rada-Iglesias
  • Stefan Enroth
  • Adam Ameur
  • Christoph M. Koch
  • Gayle K. Clelland
  • Patricia Respuela-Alonso Sarah Wilcox Oliver M. Dovey Peter D. Ellis
  • ... [+4 authors] ...,
  • Cordelia F. Langford
  • Ian Dunham
  • Jan Komorowski
  • Claes Wadelius
  • First Published June 13, 2007
ARTICLE

The landscape of histone modifications across 1% of the human genome in five human cell lines

  • Christoph M. Koch
  • Robert M. Andrews
  • Paul Flicek
  • Shane C. Dillon
  • Ulaş Karaöz
  • Gayle K. Clelland Sarah Wilcox David M. Beare Joanna C. Fowler Phillippe Couttet Keith D. James Gregory C. Lefebvre Alexander W. Bruce Oliver M. Dovey Peter D. Ellis Pawandeep Dhami Cordelia F. Langford Zhiping Weng
  • ... [+13 authors] ...,
  • Ewan Birney
  • Nigel P. Carter
  • David Vetrie
  • Ian Dunham
  • First Published June 13, 2007
Methods

Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites

  • George A. Follows
  • Pawan Dhami
  • Berthold Göttgens
  • Alexander W. Bruce
  • Peter J. Campbell
  • Shane C. Dillon Aileen M. Smith Christoph Koch Ian J. Donaldson Mike A. Scott
  • ... [+5 authors] ...,
  • Ian Dunham
  • Mary E. Janes
  • David Vetrie
  • Anthony R. Green
  • First Published September 8, 2006
LETTER

A preliminary comparative analysis of primate segmental duplications shows elevated substitution rates and a great-ape expansion of intrachromosomal duplications

  • Xinwei She
  • Ge Liu
  • Mario Ventura
  • Shaying Zhao
  • Doriana Misceo
  • Roberta Roberto Maria Francesca Cardone
  • ... [+2 authors] ...,
  • Mariano Rocchi
  • Eric D. Green
  • Nicoletta Archidiacano
  • Evan E. Eichler
  • First Published April 10, 2006
LETTER

The portability of tagSNPs across populations: A worldwide survey

  • Anna González-Neira
  • Xiayi Ke
  • Oscar Lao
  • Francesc Calafell
  • Arcadi Navarro
  • David Comas Howard Cann Suzannah Bumpstead Jilur Ghori Sarah Hunt
  • ... [+5 authors] ...,
  • Panos Deloukas
  • Ian Dunham
  • Lon R. Cardon
  • Jaume Bertranpetit
  • First Published February 8, 2006
LETTER

Recurrent Sites for New Centromere Seeding

  • Mario Ventura
  • Stefania Weigl
  • Lucia Carbone
  • Maria Francesca Cardone
  • Doriana Misceo
  • Mariagrazia Teti Pietro D'Addabbo Annelise Wandall Erik Björck Pieter J. de Jong
  • ... [+5 authors] ...,
  • Xinwei She
  • Evan E. Eichler
  • Nicoletta Archidiacono
  • Mariano Rocchi
  • First Published September 1, 2004
ARTICLE

Regional Patterns of Gene Expression in Human and Chimpanzee Brains

  • Philipp Khaitovich
  • Bjoern Muetzel
  • Xinwei She
  • Michael Lachmann
  • Ines Hellmann
  • Janko Dietzsch Stephan Steigele Hong-Hai Do Gunter Weiss Wolfgang Enard Florian Heissig
  • ... [+6 authors] ...,
  • Thomas Arendt
  • Kay Nieselt-Struwe
  • Evan E. Eichler
  • Svante Pääbo
  • First Published August 2, 2004
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