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Method

High-throughput single-cell DNA sequencing of acute myeloid leukemia tumors with droplet microfluidics

  • Maurizio Pellegrino
  • Adam Sciambi
  • Sebastian Treusch
  • Robert Durruthy-Durruthy
  • Kaustubh Gokhale
  • Jose Jacob Tina X. Chen Jennifer A. Geis William Oldham Jairo Matthews Hagop Kantarjian P. Andrew Futreal
  • ... [+7 authors] ...,
  • Keyur Patel
  • Keith W. Jones
  • Koichi Takahashi
  • Dennis J. Eastburn
  • First Published August 7, 2018
Method

Estimation of rearrangement phylogeny for cancer genomes

  • Chris D. Greenman
  • Erin D. Pleasance
  • Scott Newman
  • Fengtang Yang
  • Beiyuan Fu
  • Serena Nik-Zainal David Jones King Wai Lau Nigel Carter
  • ... [+4 authors] ...,
  • Paul A.W. Edwards
  • P. Andrew Futreal
  • Michael R. Stratton
  • Peter J. Campbell
  • First Published October 12, 2011
Letter

Functional diversity for REST (NRSF) is defined by in vivo binding affinity hierarchies at the DNA sequence level

  • Alexander W. Bruce
  • Andrés J. López-Contreras
  • Paul Flicek
  • Thomas A. Down
  • Pawandeep Dhami
  • Shane C. Dillon Christoph M. Koch
  • ... [+2 authors] ...,
  • Cordelia F. Langford
  • Ian Dunham
  • Robert M. Andrews
  • David Vetrie
  • First Published April 28, 2009
LETTER

Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets

  • David S. Johnson
  • Wei Li
  • D. Benjamin Gordon
  • Arindam Bhattacharjee
  • Bo Curry
  • Jayati Ghosh Leonardo Brizuela Jason S. Carroll Myles Brown Paul Flicek Christoph M. Koch Ian Dunham Mark Bieda Xiaoqin Xu Peggy J. Farnham Philipp Kapranov David A. Nix Thomas R. Gingeras Xinmin Zhang Heather Holster Nan Jiang Roland D. Green Jun S. Song Scott A. McCuine Elizabeth Anton Loan Nguyen Nathan D. Trinklein Zhen Ye Keith Ching David Hawkins Bing Ren Peter C. Scacheri Joel Rozowsky Alexander Karpikov Ghia Euskirchen Sherman Weissman Mark Gerstein Michael Snyder Annie Yang Zarmik Moqtaderi Heather Hirsch Hennady P. Shulha Yutao Fu Zhiping Weng
  • ... [+39 authors] ...,
  • Kevin Struhl
  • Richard M. Myers
  • Jason D. Lieb
  • X. Shirley Liu
  • First Published February 7, 2008
LETTER

Architectures of somatic genomic rearrangement in human cancer amplicons at sequence-level resolution

  • Graham R. Bignell
  • Thomas Santarius
  • Jessica C.M. Pole
  • Adam P. Butler
  • Janet Perry
  • Erin Pleasance Chris Greenman Andrew Menzies Sheila Taylor Sarah Edkins Peter Campbell Michael Quail Bob Plumb Lucy Matthews Kirsten McLay Paul A.W. Edwards
  • ... [+11 authors] ...,
  • Jane Rogers
  • Richard Wooster
  • P. Andrew Futreal
  • Michael R. Stratton
  • First Published August 3, 2007
ARTICLE

Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genes

  • Alvaro Rada-Iglesias
  • Stefan Enroth
  • Adam Ameur
  • Christoph M. Koch
  • Gayle K. Clelland
  • Patricia Respuela-Alonso Sarah Wilcox Oliver M. Dovey Peter D. Ellis
  • ... [+4 authors] ...,
  • Cordelia F. Langford
  • Ian Dunham
  • Jan Komorowski
  • Claes Wadelius
  • First Published June 13, 2007
ARTICLE

The landscape of histone modifications across 1% of the human genome in five human cell lines

  • Christoph M. Koch
  • Robert M. Andrews
  • Paul Flicek
  • Shane C. Dillon
  • Ulaş Karaöz
  • Gayle K. Clelland Sarah Wilcox David M. Beare Joanna C. Fowler Phillippe Couttet Keith D. James Gregory C. Lefebvre Alexander W. Bruce Oliver M. Dovey Peter D. Ellis Pawandeep Dhami Cordelia F. Langford Zhiping Weng
  • ... [+13 authors] ...,
  • Ewan Birney
  • Nigel P. Carter
  • David Vetrie
  • Ian Dunham
  • First Published June 13, 2007
Methods

Identifying gene regulatory elements by genomic microarray mapping of DNaseI hypersensitive sites

  • George A. Follows
  • Pawan Dhami
  • Berthold Göttgens
  • Alexander W. Bruce
  • Peter J. Campbell
  • Shane C. Dillon Aileen M. Smith Christoph Koch Ian J. Donaldson Mike A. Scott
  • ... [+5 authors] ...,
  • Ian Dunham
  • Mary E. Janes
  • David Vetrie
  • Anthony R. Green
  • First Published September 8, 2006
LETTER

The portability of tagSNPs across populations: A worldwide survey

  • Anna González-Neira
  • Xiayi Ke
  • Oscar Lao
  • Francesc Calafell
  • Arcadi Navarro
  • David Comas Howard Cann Suzannah Bumpstead Jilur Ghori Sarah Hunt
  • ... [+5 authors] ...,
  • Panos Deloukas
  • Ian Dunham
  • Lon R. Cardon
  • Jaume Bertranpetit
  • First Published February 8, 2006
ARTICLE

A survey of RNA editing in human brain

  • Matthew Blow
  • P. Andrew Futreal
  • Richard Wooster
  • Michael R. Stratton
  • First Published November 15, 2004
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