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Long-read genome sequencing and variant reanalysis increase diagnostic yield in neurodevelopmental disorders

  • Susan M. Hiatt
  • James M.J. Lawlor
  • Lori H. Handley
  • Donald R. Latner
  • Zachary T. Bonnstetter
  • Candice R. Finnila Michelle L. Thompson Lori Beth Boston Melissa Williams Ivan Rodriguez Nunez Jerry Jenkins Whitley V. Kelley E. Martina Bebin Michael A. Lopez Anna C.E. Hurst
  • ... [+10 authors] ...,
  • Bruce R. Korf
  • Jeremy Schmutz
  • Jane Grimwood
  • Gregory M. Cooper
  • First Published September 19, 2024

Allele-specific transcription factor binding across human brain regions offers mechanistic insight into eQTLs

  • Ashlyn G. Anderson
  • Belle A. Moyers
  • Jacob M. Loupe
  • Ivan Rodriguez-Nunez
  • Stephanie A. Felker
  • James M.J. Lawlor William E. Bunney Blynn G. Bunney Preston M. Cartagena Adolfo Sequeira Stanley J. Watson
  • ... [+6 authors] ...,
  • Huda Akil
  • Eric M. Mendenhall
  • Gregory M. Cooper
  • Richard M. Myers
  • First Published August 16, 2024

cis-regulatory elements" > Probabilistic association of differentially expressed genes with cis-regulatory elements

  • Brian S. Roberts
  • Ashlyn G. Anderson
  • E. Christopher Partridge
  • Gregory M. Cooper
  • Richard M. Myers
  • First Published April 17, 2024

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

  • Brian S. Roberts
  • E. Christopher Partridge
  • Bryan A. Moyers
  • Vikram Agarwal
  • Kimberly M. Newberry
  • Beth K. Martin
  • Jay Shendure
  • Richard M. Myers
  • Gregory M. Cooper
  • First Published April 20, 2021

Corrigendum: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity

  • Fumitaka Inoue
  • Martin Kircher
  • Beth Martin
  • Gregory M. Cooper
  • Daniela M. Witten
  • Michael T. McManus
  • Nadav Ahituv
  • Jay Shendure
  • First Published May 1, 2018

A genome-wide interactome of DNA-associated proteins in the human liver

  • Ryne C. Ramaker
  • Daniel Savic
  • Andrew A. Hardigan
  • Kimberly Newberry
  • Gregory M. Cooper
  • Richard M. Myers
  • Sara J. Cooper
  • First Published October 11, 2017

A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity

  • Fumitaka Inoue
  • Martin Kircher
  • Beth Martin
  • Gregory M. Cooper
  • Daniela M. Witten
  • Michael T. McManus
  • Nadav Ahituv
  • Jay Shendure
  • First Published November 9, 2016

Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/ enhancer-binding protein beta binding sites

  • Daniel Savic
  • Brian S. Roberts
  • Julia B. Carleton
  • E. Christopher Partridge
  • Michael A. White
  • Barak A. Cohen
  • Gregory M. Cooper
  • Jason Gertz
  • Richard M. Myers
  • First Published October 20, 2015

Parlez-vous VUS?

  • Gregory M. Cooper
  • First Published October 1, 2015

Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome

  • Michael S. Fitzsimons
  • Mark Novotny
  • Chien-Chi Lo
  • Armand E.K. Dichosa
  • Joyclyn L. Yee-Greenbaum
  • Jeremy P. Snook Wei Gu Olga Chertkov Karen W. Davenport Kim McMurry Krista G. Reitenga Ashlynn R. Daughton Jian He Shannon L. Johnson Cheryl D. Gleasner Patti L. Wills Beverly Parson-Quintana
  • ... [+12 authors] ...,
  • Patrick S. Chain
  • John C. Detter
  • Roger S. Lasken
  • Cliff S. Han
  • First Published March 14, 2013
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