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Resource

An integrative TAD catalog in lymphoblastoid cell lines discloses the functional impact of deletions and insertions in human genomes

  • Chong Li
  • Marc Jan Bonder
  • Sabriya Syed
  • Matthew Jensen
  • Mark B. Gerstein
  • Michael C. Zody Mark J.P. Chaisson Michael E. Talkowski Tobias Marschall
  • ... [+4 authors] ...,
  • Jan O. Korbel
  • Evan E. Eichler
  • Charles Lee
  • Xinghua Shi
  • First Published December 5, 2024
Method

Assessing and mitigating privacy risks of sparse, noisy genotypes by local alignment to haplotype databases

  • Prashant S. Emani
  • Maya N. Geradi
  • Gamze Gürsoy
  • Monica R. Grasty
  • Andrew Miranker
  • Mark B. Gerstein
  • First Published December 14, 2023
Corrigendum

Corrigendum: Evolutionary expansion of DNA hypomethylation in the mammalian germline genome

  • Jianghan Qu
  • Emily Hodges
  • Antoine Molaro
  • Pascal Gagneux
  • Matthew D. Dean
  • Gregory J. Hannon
  • Andrew D. Smith
  • First Published May 1, 2018
Research

Evolutionary expansion of DNA hypomethylation in the mammalian germline genome

  • Jianghan Qu
  • Emily Hodges
  • Antoine Molaro
  • Pascal Gagneux
  • Matthew D. Dean
  • Gregory J. Hannon
  • Andrew D. Smith
  • First Published December 19, 2017
Research

Dynamic RNA–protein interactions underlie the zebrafish maternal-to-zygotic transition

  • Vladimir Despic
  • Mario Dejung
  • Mengting Gu
  • Jayanth Krishnan
  • Jing Zhang
  • Lydia Herzel
  • ... [+1 authors] ...,
  • Korinna Straube
  • Mark B. Gerstein
  • Falk Butter
  • Karla M. Neugebauer
  • First Published April 5, 2017
Research

Pangolin genomes and the evolution of mammalian scales and immunity

  • Siew Woh Choo
  • Mike Rayko
  • Tze King Tan
  • Ranjeev Hari
  • Aleksey Komissarov
  • Wei Yee Wee Andrey A. Yurchenko Sergey Kliver Gaik Tamazian Agostinho Antunes Richard K. Wilson Wesley C. Warren Klaus-Peter Koepfli Patrick Minx Ksenia Krasheninnikova Antoinette Kotze Desire L. Dalton Elaine Vermaak Ian C. Paterson Pavel Dobrynin Frankie Thomas Sitam Jeffrine J. Rovie-Ryan Warren E. Johnson Aini Mohamed Yusoff Shu-Jin Luo Kayal Vizi Karuppannan Gang Fang Deyou Zheng
  • ... [+23 authors] ...,
  • Mark B. Gerstein
  • Leonard Lipovich
  • Stephen J. O'Brien
  • Guat Jah Wong
  • First Published August 10, 2016
Research

De novo DNA demethylation and noncoding transcription define active intergenic regulatory elements

  • Felix Schlesinger
  • Andrew D. Smith
  • Thomas R. Gingeras
  • Gregory J. Hannon
  • Emily Hodges
  • First Published June 28, 2013
Research

Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb

  • Justin Cotney
  • Jing Leng
  • Sunghee Oh
  • Laura E. DeMare
  • Steven K. Reilly
  • Mark B. Gerstein
  • James P. Noonan
  • First Published March 15, 2012
Research

Ascaris reveals conservation, functional diversification, and novel developmental profiles" > Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles

  • Jianbin Wang
  • Benjamin Czech
  • Amanda Crunk
  • Adam Wallace
  • Makedonka Mitreva
  • Gregory J. Hannon
  • Richard E. Davis
  • First Published June 17, 2011
Research

KIF1A in hereditary spastic paraparesis" > Exome sequencing and disease-network analysis of a single family implicate a mutation in KIF1A in hereditary spastic paraparesis

  • Yaniv Erlich
  • Simon Edvardson
  • Emily Hodges
  • Shamir Zenvirt
  • Pramod Thekkat
  • Avraham Shaag
  • Talya Dor
  • Gregory J. Hannon
  • Orly Elpeleg
  • First Published April 12, 2011
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