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Method

Simultaneous modeling of chromatin conformation changes from multiple single-cell interaction maps with ChromMovie

  • First Published April 8, 2026
Method

Profiling the quantitative occupancy of myriad transcription factors across conditions by modeling chromatin accessibility data

  • First Published May 24, 2022
Research

An AR-ERG transcriptional signature defined by long-range chromatin interactomes in prostate cancer cells

  • First Published January 3, 2019
Method

cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants" > Human cardiac cis-regulatory elements, their cognate transcription factors, and regulatory DNA sequence variants

  • First Published August 23, 2018
Research

Glucocorticoid receptor recruits to enhancers and drives activation by motif-directed binding

  • First Published August 10, 2018
Corrigendum

Corrigendum: Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal

  • First Published December 1, 2017
Research

Microbiota regulate intestinal epithelial gene expression by suppressing the transcription factor Hepatocyte nuclear factor 4 alpha

  • First Published April 6, 2017
Corrigendum

Corrigendum: Characterization of the neural stem cell gene regulatory network identifies OLIG2 as a multifunctional regulator of self-renewal

  • First Published November 1, 2016
Method

An integrated 3-Dimensional Genome Modeling Engine for data-driven simulation of spatial genome organization

  • First Published October 27, 2016
Method

Mapping nucleosome positions using DNase-seq

  • First Published January 15, 2016
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