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CL_GR_Clone_LBSite

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Method

Interpretation of allele-specific chromatin accessibility using cell state–aware deep learning

Zeynep Kalender Atak
Ibrahim Ihsan Taskiran
Jonas Demeulemeester
Christopher Flerin
David Mauduit
Liesbeth Minnoye Gert Hulselmans
... [+2 authors] ...,
Valerie Christiaens
Ghanem-Elias Ghanem
Jasper Wouters
Stein Aerts

First Published April 8, 2021

Method

Cross-species analysis of enhancer logic using deep learning

Liesbeth Minnoye
Ibrahim Ihsan Taskiran
David Mauduit
Maurizio Fazio
Linde Van Aerschot
Gert Hulselmans Valerie Christiaens Samira Makhzami Monika Seltenhammer Panagiotis Karras Aline Primot Edouard Cadieu Ellen van Rooijen Jean-Christophe Marine Giorgia Egidy
... [+10 authors] ...,
Ghanem-Elias Ghanem
Leonard Zon
Jasper Wouters
Stein Aerts

First Published July 30, 2020

Research

Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic

Annelien Verfaillie
Dmitry Svetlichnyy
Hana Imrichova
Kristofer Davie
Mark Fiers
Zeynep Kalender Atak
Gert Hulselmans
Valerie Christiaens
Stein Aerts

First Published May 18, 2016