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Method

Simple and efficient profiling of transcription initiation and transcript levels with STRIPE-seq

  • Robert A. Policastro
  • R. Taylor Raborn
  • Volker P. Brendel
  • Gabriel E. Zentner
  • First Published July 6, 2020
Research

Asymmetric nucleosomes flank promoters in the budding yeast genome

  • Srinivas Ramachandran
  • Gabriel E. Zentner
  • Steven Henikoff
  • First Published December 9, 2014
Research

Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration

  • Weisheng Wu
  • Yong Cheng
  • Cheryl A. Keller
  • Jason Ernst
  • Swathi Ashok Kumar
  • Tejaswini Mishra Christapher Morrissey Christine M. Dorman Kuan-Bei Chen Daniela Drautz Belinda Giardine Yoichiro Shibata Lingyun Song Max Pimkin Gregory E. Crawford Terrence S. Furey Manolis Kellis Webb Miller James Taylor Stephan C. Schuster Yu Zhang
  • ... [+16 authors] ...,
  • Francesca Chiaromonte
  • Gerd A. Blobel
  • Mitchell J. Weiss
  • Ross C. Hardison
  • First Published July 27, 2011
Research

Epigenetic signatures distinguish multiple classes of enhancers with distinct cellular functions

  • Gabriel E. Zentner
  • Paul J. Tesar
  • Peter C. Scacheri
  • First Published June 1, 2011
Method

Genome-wide identification of conserved regulatory function in diverged sequences

  • Leila Taher
  • David M. McGaughey
  • Samantha Maragh
  • Ivy Aneas
  • Seneca L. Bessling
  • Webb Miller
  • Marcelo A. Nobrega
  • Andrew S. McCallion
  • Ivan Ovcharenko
  • First Published May 31, 2011
Research

Slc35b4, regulates obesity and glucose homeostasis" > Deep congenic analysis identifies many strong, context-dependent QTLs, one of which, Slc35b4, regulates obesity and glucose homeostasis

  • Soha N. Yazbek
  • David A. Buchner
  • Jonathan M. Geisinger
  • Lindsay C. Burrage
  • Sabrina H. Spiezio
  • Gabriel E. Zentner
  • ... [+1 authors] ...,
  • Chang-Wen Hsieh
  • Peter C. Scacheri
  • Colleen M. Croniger
  • Joseph H. Nadeau
  • First Published April 19, 2011
Article

Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression

  • Yong Cheng
  • Weisheng Wu
  • Swathi Ashok Kumar
  • Duonan Yu
  • Wulan Deng
  • Tamara Tripic David C. King Kuan-Bei Chen Ying Zhang Daniela Drautz Belinda Giardine Stephan C. Schuster Webb Miller Francesca Chiaromonte
  • ... [+9 authors] ...,
  • Yu Zhang
  • Gerd A. Blobel
  • Mitchell J. Weiss
  • Ross C. Hardison
  • First Published November 3, 2009
Letter

Genomic distribution of CHD7 on chromatin tracks H3K4 methylation patterns

  • Michael P. Schnetz
  • Cynthia F. Bartels
  • Kuntal Shastri
  • Dheepa Balasubramanian
  • Gabriel E. Zentner
  • Ravishankar Balaji Xiaodong Zhang Lingyun Song
  • ... [+3 authors] ...,
  • Zhenghe Wang
  • Thomas LaFramboise
  • Gregory E. Crawford
  • Peter C. Scacheri
  • First Published February 27, 2009
LETTER

Thylacinus cynocephalus)" > The mitochondrial genome sequence of the Tasmanian tiger (Thylacinus cynocephalus)

  • Webb Miller
  • Daniela I. Drautz
  • Jan E. Janecka
  • Arthur M. Lesk
  • Aakrosh Ratan
  • Lynn P. Tomsho Mike Packard Yeting Zhang Lindsay R. McClellan Ji Qi Fangqing Zhao M. Thomas P. Gilbert Love Dalén Juan Luis Arsuaga Per G.P. Ericson Daniel H. Huson
  • ... [+11 authors] ...,
  • Kristofer M. Helgen
  • William J. Murphy
  • Anders Götherström
  • Stephan C. Schuster
  • First Published January 12, 2009
LETTER

Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif

  • Yong Cheng
  • David C. King
  • Louis C. Dore
  • Xinmin Zhang
  • Yuepin Zhou
  • Ying Zhang Christine Dorman Demesew Abebe Swathi A. Kumar Francesca Chiaromonte
  • ... [+5 authors] ...,
  • Webb Miller
  • Roland D. Green
  • Mitchell J. Weiss
  • Ross C. Hardison
  • First Published September 25, 2008
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