Search | Genome Research

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Method

Multisource omic alignment and biological feature discovery with Performer encoder and triplet networks

Zihuan Du
Xiaoyu Zhang
Qiang Zhang
Jing Li
Zhijie Cao
Ge Gao
Tao Lin
Dong Wang
Shuai Gao

First Published July 22, 2026

Research

LTR7-PLAAT4 as a potential oncogene and therapeutic target in pancreatic adenocarcinoma" > Transcriptomic landscape of transposable elements reveals LTR7-PLAAT4 as a potential oncogene and therapeutic target in pancreatic adenocarcinoma

Meilong Shi
Chuanqi Teng
Shan Zhang
Xiaobo He
Lingyun Xu
Fengxian Han Rongqi Wen Ganjun Yu Jingwen Liu Yang Feng
... [+5 authors] ...,
Yanfeng Wu
Yan Ren
Gang Jin
Jing Li

First Published January 8, 2026

Resource

Haplotype-resolved 3D chromatin architecture of the hybrid pig

Yu Lin
Jing Li
Yiren Gu
Long Jin
Jingyi Bai
Jiaman Zhang Yujie Wang Pengliang Liu Keren Long Mengnan He Diyan Li Can Liu Ziyin Han Yu Zhang Xiaokai Li Bo Zeng Lu Lu Fanli Kong Ying Sun Yongliang Fan Xun Wang Tao Wang An'an Jiang Jideng Ma Linyuan Shen Li Zhu Yanzhi Jiang Guoqing Tang Xiaolan Fan Qingyou Liu Hua Li Jinyong Wang Li Chen
... [+28 authors] ...,
Liangpeng Ge
Xuewei Li
Qianzi Tang
Mingzhou Li

First Published March 13, 2024

Method

Accurate sequencing of DNA motifs able to form alternative (non-B) structures

Matthias H. Weissensteiner
Marzia A. Cremona
Wilfried M. Guiblet
Nicholas Stoler
Robert S. Harris
Monika Cechova
... [+1 authors] ...,
Kristin A. Eckert
Francesca Chiaromonte
Yi-Fei Huang
Kateryna D. Makova

First Published July 11, 2023

Research

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome

Wilfried M. Guiblet
Michael DeGiorgio
Xiaoheng Cheng
Francesca Chiaromonte
Kristin A. Eckert
Yi-Fei Huang
Kateryna D. Makova

First Published June 29, 2021

Resource

A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes

Jing Liu
Zongji Wang
Jing Li
Luohao Xu
Jiaqi Liu
Shaohong Feng Chunxue Guo Shengchan Chen Zhanjun Ren Jinpeng Rao Kai Wei
... [+6 authors] ...,
Yuezhou Chen
Erich D. Jarvis
Guojie Zhang
Qi Zhou

First Published January 6, 2021

Research

Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate

Wilfried M. Guiblet
Marzia A. Cremona
Monika Cechova
Robert S. Harris
Iva Kejnovská
Eduard Kejnovsky
Kristin Eckert
Francesca Chiaromonte
Kateryna D. Makova

First Published November 6, 2018

Research

Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis

Hector L. Franco
Anusha Nagari
Venkat S. Malladi
Wenqian Li
Yuanxin Xi
Dana Richardson Kendra L. Allton Kaori Tanaka Jing Li Shino Murakami Khandan Keyomarsi Mark T. Bedford Xiaobing Shi
... [+8 authors] ...,
Wei Li
Michelle C. Barton
Sharon Y.R. Dent
W. Lee Kraus

First Published December 22, 2017

Research

Yeast genetic interaction screen of human genes associated with amyotrophic lateral sclerosis: identification of MAP2K5 kinase as a potential drug target

Myungjin Jo
Ah Young Chung
Nozomu Yachie
Minchul Seo
Hyejin Jeon
Youngpyo Nam Yeojin Seo Eunmi Kim Quan Zhong
... [+4 authors] ...,
Marc Vidal
Hae Chul Park
Frederick P. Roth
Kyoungho Suk

First Published June 8, 2017

Corrigendum

Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome?

Arkarachai Fungtammasan
Erin Walsh
Francesca Chiaromonte
Kristin A. Eckert
Kateryna D. Makova

First Published October 3, 2016

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