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Resource

Tetrahymena" > A systems view on DNA damage response kinetics in Tetrahymena

  • Emily Nischwitz
  • Vivien A.C. Schoonenberg
  • Rachel Mullner
  • Albert Fradera-Sola
  • Susanne Zimbelmann
  • Joshua J. Smith
  • Falk Butter
  • First Published January 28, 2026
Method

Multicondition and multimodal temporal profile inference during mouse embryonic development

  • Ran Zhang
  • Chengxiang Qiu
  • Galina N. Filippova
  • Gang Li
  • Jay Shendure
  • Jean-Philippe Vert
  • Xinxian Deng
  • William Stafford Noble
  • Christine M. Disteche
  • First Published August 14, 2025
Research

Paramecium" > ISWI1 complex proteins facilitate developmental genome editing in Paramecium

  • Aditi Singh
  • Lilia Häußermann
  • Christiane Emmerich
  • Emily Nischwitz
  • Brandon K.B. Seah
  • Falk Butter
  • Mariusz Nowacki
  • Estienne C. Swart
  • First Published November 14, 2024
Research

TERT promoter" > E4F1 and ZNF148 are transcriptional activators of the −57A > C and wild-type TERT promoter

  • Boon Haow Chua
  • Nurkaiyisah Zaal Anuar
  • Laure Ferry
  • Cecilia Domrane
  • Anna Wittek
  • Vineeth T. Mukundan Sudhakar Jha
  • ... [+2 authors] ...,
  • Falk Butter
  • Daniel G. Tenen
  • Pierre-Antoine Defossez
  • Dennis Kappei
  • First Published November 2, 2023
Method

Nematode gene annotation by machine-learning-assisted proteotranscriptomics enables proteome-wide evolutionary analysis

  • Alejandro Ceron-Noriega
  • Miguel V. Almeida
  • Michal Levin
  • Falk Butter
  • First Published January 18, 2023
Research

Rhizophagus irregularis" > Transcriptional activity and epigenetic regulation of transposable elements in the symbiotic fungus Rhizophagus irregularis

  • Alexandra Dallaire
  • Bethan F. Manley
  • Maya Wilkens
  • Iliana Bista
  • Clement Quan
  • Edouard Evangelisti Charles R. Bradshaw Navin B. Ramakrishna
  • ... [+3 authors] ...,
  • Sebastian Schornack
  • Falk Butter
  • Uta Paszkowski
  • Eric A. Miska
  • First Published November 12, 2021
Resource

Caenorhabditis elegans nematodes" > Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes

  • Timothy J. Durham
  • Riza M. Daza
  • Louis Gevirtzman
  • Darren A. Cusanovich
  • Olubusayo Bolonduro
  • William Stafford Noble
  • Jay Shendure
  • Robert H. Waterston
  • First Published April 22, 2021
Research

Genome-wide strand asymmetry in massively parallel reporter activity favors genic strands

  • Brian S. Roberts
  • E. Christopher Partridge
  • Bryan A. Moyers
  • Vikram Agarwal
  • Kimberly M. Newberry
  • Beth K. Martin
  • Jay Shendure
  • Richard M. Myers
  • Gregory M. Cooper
  • First Published April 20, 2021
Research

Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology" > Suppressor mutations in Mecp2-null mice implicate the DNA damage response in Rett syndrome pathology

  • Adebola Enikanolaiye
  • Julie Ruston
  • Rong Zeng
  • Christine Taylor
  • Marijke Schrock
  • Christie M. Buchovecky
  • Jay Shendure
  • Elif Acar
  • Monica J. Justice
  • First Published April 21, 2020
Corrigendum

Corrigendum: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity

  • Fumitaka Inoue
  • Martin Kircher
  • Beth Martin
  • Gregory M. Cooper
  • Daniela M. Witten
  • Michael T. McManus
  • Nadav Ahituv
  • Jay Shendure
  • First Published May 1, 2018
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