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Resource

Tetrahymena" > A systems view on DNA damage response kinetics in Tetrahymena

  • Emily Nischwitz
  • Vivien A.C. Schoonenberg
  • Rachel Mullner
  • Albert Fradera-Sola
  • Susanne Zimbelmann
  • Joshua J. Smith
  • Falk Butter
  • First Published January 28, 2026
Research

Paramecium" > ISWI1 complex proteins facilitate developmental genome editing in Paramecium

  • Aditi Singh
  • Lilia Häußermann
  • Christiane Emmerich
  • Emily Nischwitz
  • Brandon K.B. Seah
  • Falk Butter
  • Mariusz Nowacki
  • Estienne C. Swart
  • First Published November 14, 2024
Research

TERT promoter" > E4F1 and ZNF148 are transcriptional activators of the −57A > C and wild-type TERT promoter

  • Boon Haow Chua
  • Nurkaiyisah Zaal Anuar
  • Laure Ferry
  • Cecilia Domrane
  • Anna Wittek
  • Vineeth T. Mukundan Sudhakar Jha
  • ... [+2 authors] ...,
  • Falk Butter
  • Daniel G. Tenen
  • Pierre-Antoine Defossez
  • Dennis Kappei
  • First Published November 2, 2023
Method

Nematode gene annotation by machine-learning-assisted proteotranscriptomics enables proteome-wide evolutionary analysis

  • Alejandro Ceron-Noriega
  • Miguel V. Almeida
  • Michal Levin
  • Falk Butter
  • First Published January 18, 2023
Research

Rhizophagus irregularis" > Transcriptional activity and epigenetic regulation of transposable elements in the symbiotic fungus Rhizophagus irregularis

  • Alexandra Dallaire
  • Bethan F. Manley
  • Maya Wilkens
  • Iliana Bista
  • Clement Quan
  • Edouard Evangelisti Charles R. Bradshaw Navin B. Ramakrishna
  • ... [+3 authors] ...,
  • Sebastian Schornack
  • Falk Butter
  • Uta Paszkowski
  • Eric A. Miska
  • First Published November 12, 2021
Resource

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

  • Valerie A. Schneider
  • Tina Graves-Lindsay
  • Kerstin Howe
  • Nathan Bouk
  • Hsiu-Chuan Chen
  • Paul A. Kitts Terence D. Murphy Kim D. Pruitt Françoise Thibaud-Nissen Derek Albracht Robert S. Fulton Milinn Kremitzki Vincent Magrini Chris Markovic Sean McGrath Karyn Meltz Steinberg Kate Auger William Chow Joanna Collins Glenn Harden Timothy Hubbard Sarah Pelan Jared T. Simpson Glen Threadgold James Torrance Jonathan M. Wood Laura Clarke Sergey Koren Matthew Boitano Paul Peluso Heng Li Chen-Shan Chin Adam M. Phillippy Richard Durbin
  • ... [+29 authors] ...,
  • Richard K. Wilson
  • Paul Flicek
  • Evan E. Eichler
  • Deanna M. Church
  • First Published April 10, 2017
Resource

Drosophila melanogaster" > The developmental proteome of Drosophila melanogaster

  • Nuria Casas-Vila
  • Alina Bluhm
  • Sergi Sayols
  • Nadja Dinges
  • Mario Dejung
  • Tina Altenhein
  • ... [+1 authors] ...,
  • Dennis Kappei
  • Benjamin Altenhein
  • Jean-Yves Roignant
  • Falk Butter
  • First Published April 5, 2017
Research

Dynamic RNA–protein interactions underlie the zebrafish maternal-to-zygotic transition

  • Vladimir Despic
  • Mario Dejung
  • Mengting Gu
  • Jayanth Krishnan
  • Jing Zhang
  • Lydia Herzel
  • ... [+1 authors] ...,
  • Korinna Straube
  • Mark B. Gerstein
  • Falk Butter
  • Karla M. Neugebauer
  • First Published April 5, 2017
Method

Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes

  • Dirk D. Dolle
  • Zhicheng Liu
  • Matthew Cotten
  • Jared T. Simpson
  • Zamin Iqbal
  • Richard Durbin
  • Shane A. McCarthy
  • Thomas M. Keane
  • First Published December 16, 2016
Resource

Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators

  • Marion Scheibe
  • Nausica Arnoult
  • Dennis Kappei
  • Frank Buchholz
  • Anabelle Decottignies
  • Falk Butter
  • Matthias Mann
  • First Published August 6, 2013
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