Method
Multicondition and multimodal temporal profile inference during mouse embryonic development
- First Published August 14, 2025
Method
Systematic identification of interchromosomal interaction networks supports the existence of specialized RNA factories
- First Published September 25, 2024
Method
DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools
- First Published June 7, 2024
Resource
Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes
- First Published April 22, 2021
Method
HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient
- First Published August 30, 2017
Method
Read clouds uncover variation in complex regions of the human genome
- First Published August 18, 2015
Method
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression
- First Published February 12, 2015
Method
Parente2: a fast and accurate method for detecting identity by descent
- First Published October 1, 2014
Research
Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
- First Published March 26, 2014
Method
Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts
- First Published February 5, 2014